Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq3 82.4 6e-11
>seq3
Length=2118207
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/217 (69%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171
|||| |||| ||| | || || || || || ||||||||||| | | ||| ||| |
Sbjct 53428 TAAG-ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGT 53370
Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231
||||||| || || || || |||| | ||||||||| || || | |||||||| |
Sbjct 53369 CTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGT 53310
Query 18232 CGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291
| || | |||||| | ||| ||||| || |||| ||| | ||| |||
Sbjct 53309 CCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGG 53250
Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
| || || || || || || || ||||||||||||||
Sbjct 53249 TCTTACCTGTTAAAGTCTTGACGAAAATTTGCATTTT 53213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343912158155
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |