Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3 232 6e-56 seq9 111 1e-19 >seq3 Length=2118207 Score = 232 bits (256), Expect = 6e-56 Identities = 1211/1917 (63%), Gaps = 60/1917 (3%) Strand=Plus/Plus Query 22096 AGCGGCGGTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATA 22155 ||| | ||||||||| || || ||||| ||||| || || | || ||| | | || Sbjct 1783880 AGCAGAGGTCTTGTCGACAGTGAACTGGATGGCAGCAGCAGCAGCTTGGGTTCTTAAGTA 1783939 Query 22156 ATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCC 22215 ||||| || ||||||| |||| ||||||| |||| ||||| || || || | || || Sbjct 1783940 GTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTACC 1783999 Query 22216 ATAACTCGGCAAGTCC---ATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCC 22272 | || |||| |||| | || |||||||| ||||| || || || | Sbjct 1784000 CATTGTTGG---GTCCTTGATGTGAATGTTCAACGACTGTGATTGATCAATGAAGGCAGC 1784056 Query 22273 TCGATCGGCGGCCATATTTATCAATG-TACGCATC---GACATTTCCCATACGGTCTTGT 22328 || || || ||||||| ||||| || || | || |||||||| || ||||||| Sbjct 1784057 TCTGTCAGCAGCCATAT----CAATGATATGCTTTTGTGAGATTTCCCAAACAGTCTTGT 1784112 Query 22329 ACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTA 22388 | | | ||| ||| || || | | |||||| || ||||| || | Sbjct 1784113 ATAAGGCCTTGAGCTCATCTGGAATGTTAGCCAATGTCTGGATAGAACCGTTGTTAGAAA 1784172 Query 22389 TGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGAT 22448 |||| || || || | ||||||||| | ||| | || |||||| | || | Sbjct 1784173 TGATGTTGTTCTTCATGGCATCGTTCCAGATACCCAAATCGACCAAATCACGCAACAAGT 1784232 Query 22449 GACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGA 22508 |||| || | ||| || || || | || || | | ||| ||||| || || Sbjct 1784233 ATGGGTTGACGATTTGGAATTCTCCTGCTAACACTCTTCTAGAGTAGATGTTAGAAGTAT 1784292 Query 22509 ACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCG 22568 | || |||||| |||| ||||| |||| ||| |||| || |||||||| ||||| || | Sbjct 1784293 ATGGCTCGAAACATTCGTTGTTACCCAATATTTGAGAAGTAGAAGCGGTTGGCATTGGAG 1784352 Query 22569 CCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGA--GCATCGACCA 22626 | | | | ||||||||||| |||||||| | | || ||| | ||||| ||| Sbjct 1784353 CAACTAACAAGGAGTTTCTCAAACCGTGCTTGGCCAACTTCTGCTTCAATGCATC--CCA 1784410 Query 22627 GTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACT 22686 |||||| | || | ||| | | ||||||| || |||| |||| || || Sbjct 1784411 GTCCCATAACTCAGTTGGCTTTC---TCTCCCACAAGTCAAATTGTAACAAACCTTGAGA 1784467 Query 22687 CGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGC--GGCAAGTTCGCAGCTC 22744 || ||| || ||||| | ||| || ||||| | | ||| | ||| | || Sbjct 1784468 TGCTGGGGAACCCTCGTAAGATTCATAAGGACCTTCT-TCGGAAGCCAACTCAATAGAG- 1784525 Query 22745 GCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCG 22804 || || | || |||| || || ||||||||||||| |||||||||| || | Sbjct 1784526 GCTTCGACGGCACCGTGGTAGATGGTCTCGAAGATTTGGATGTTCAATTCTCTAGCTTCT 1784585 Query 22805 ACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATA 22864 ||| | || | | || || ||| | ||| |||| ||| || || || | Sbjct 1784586 TGAGAGTCGAATGGTAATCTCAATGCCATGAAAGTGTCGGCCAAACCTTGTACACCCAAG 1784645 Query 22865 CCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAA 22924 | || |||| ||| || || || | || || || | || || | || Sbjct 1784646 GCAATTGGTCTATTTCTCTTGTTAGATCTCTCGGCTTCTGGAACTGGGTAGTAGTTTCTG 1784705 Query 22925 TCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAG 22984 ||||| | |||||||||| | ||| ||| || || | |||||| Sbjct 1784706 TCGATGATCTTGTTCAAGTTACGGGTAACAGACTTGGTGACGTCATGCAACTTCTCAAAG 1784765 Query 22985 TCGTA----AACGCCCGATTGTA--------CAACAAACTTGTTGACG--GCGATCGAGG 23030 | ||| || | | |||| || |||| | || | ||||| |||| Sbjct 1784766 TTGTACCACAAAGAC---TTGTCATCCTTCTCAGCAAAA--GATGGCAAAGCGATAGAGG 1784820 Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 | | ||| || || || || || ||| || | |||||| || || || ||| | | Sbjct 1784821 CCAAATTACAGACAGCAACTTCCTCTGGAGAGGAGTACTCGACGATCTCACAACACAAGT 1784880 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150 | | |||| || | ||||| || |||||||| | || || || | |||||||| Sbjct 1784881 TAGAAGACTTAATTATACCCAAGTTCTTCTGGTTGGTCTTCTTGTTACAGGCATCCTTGT 1784940 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210 | | |||| | || || || || || ||| | ||| | ||| || ||||| | | Sbjct 1784941 ACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCCTCCAAGATGGCGTACCACAACTTTT 1785000 Query 23211 GAGCGTGAACACGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACGCGTC 23268 |||| | || || || ||||| |||||| |||||| || ||| ||| | || Sbjct 1785001 GAGCCTTGACG-GT-GCTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATAACTCTTC 1785058 Query 23269 AAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCA 23328 |||||| |||||||| || | || ||| || | || | ||| | | ||| |||| Sbjct 1785059 GAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCA 1785118 Query 23329 CATTGAGTCATT---TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 || | |||| ||| || | |||| || | ||| || ||||| | ||| ||| Sbjct 1785119 --TTCAC-CATTCTGTTCCACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAA 1785175 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || | || | | || || || ||| |||||| | | || | ||||| || Sbjct 1785176 CAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAA 1785235 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 | ||| || ||||| ||||| | ||| | |||||| || || || | ||| || || || Sbjct 1785236 GATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACCTGGACGCTTGTTACCACC 1785295 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || || ||||| | || ||||||||| | || | | ||| || | | ||||||||| Sbjct 1785296 TTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGAATAATACCGTTGGA 1785355 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | ||| || || | | ||| | | || | |||||||| ||| ||||| Sbjct 1785356 GGTACCGTTAGTACCAGCAATGTAAGCACCAGTAGAACGGATGTTGTGAATGTGCAAACC 1785415 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || || | || || |||| || || |||| |||||||| || || || Sbjct 1785416 AATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGGTGTCGTAAATACCATC 1785475 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 || ||| || || | ||||| | |||||| ||||||||||| | || ||| | Sbjct 1785476 AATAGAGTCGTCCTTCATTGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACC 1785535 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 || ||||| || || |||| || ||| | | | ||||| | ||||| | Sbjct 1785536 AGCGTTGAACAAAGTAGGAGAACCGTGGGTGAAGAAACGTTGAGACATCAAGTTGTAAGA 1785595 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 |||||| | || ||||| || ||||| ||||| |||| || | ||| |||| | Sbjct 1785596 TTCGATGACCTTCTCGATGTCGTCACCGTGAATACCAATGGAAACTCTCATGATCAAATG 1785655 Query 23866 TTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922 ||| ||||| | ||||| | ||||| | || ||||| || | | || || Sbjct 1785656 TTGTGGTCTTTCAGCGACCTT---ACCGTTGACACGTAAAAGATACGATCTCTCCAAAGT 1785712 Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 || || || || |||| ||||| || ||||| |||| ||| |||||||| ||||| Sbjct 1785713 CTTGAAACCGAAGTAGTTGTAGTTGAAATCACGGTCGTACACAATGGCCGAGTTCAA 1785769 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| |||||| | ||||| || || || ||| | || || || | Sbjct 53213 AAAATGCAAATTTTCGTCAAGACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAGTCC 53272 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| | || | ||||| | || |||||||||||| | || || ||| Sbjct 53273 TCCGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCTGAC 53332 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | | || |||||||| || |||||||||||| || || | || || Sbjct 53333 CAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACCCTTTCTGACTAC 53392 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| || || || || || | || |||| | ||| |||| || ||| Sbjct 53393 AACATCCAGAAGGAGTCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGGT 53443 >seq9 Length=507287 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| | || || || || || ||| | || ||||| | ||| Sbjct 283032 ATGCAAATCTTCGTTAAGACATTAACCGGTAAGACCATTACCTTGGAAGTTGAGTCTTCC 282973 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | || ||||||||||| | || || ||||| Sbjct 282972 GATACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 282913 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| |||| |||||||| || || ||||||||| || ||| | || || ||| Sbjct 282912 CAGCGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 282853 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| |||||||| |||| | ||| |||| || |||| Sbjct 282852 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGTA 282804 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/229 (66%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| | || || || || || || | || ||||| | || Sbjct 282576 ATGCAAATCTTCGTYAAGACWTTRACYGGTAAGACCATTACYYTKGARGTTGARTCTTCY 282517 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || | || ||||||||||| | || || || || Sbjct 282516 GAYACYATTGACAACGTYAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGAYCAA 282457 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||| || || || || |||||| || ||| | || || ||| Sbjct 282456 CARMGWTTRATYTTCGCYGGTAAGCAATTRGAAGACGGTAGAACTCTTTCTGACTACAAC 282397 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| |||||||| | || | ||| |||| || |||| Sbjct 282396 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTGAGATTGAGAGGTGGTA 282348 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| |||| || || || || || | || |||||| | || Sbjct 282348 ATGCAAATCTTCGTYAAGACTTTGACTGGTAAGACCATTACTCTTGARGTTGAATCTTCT 282289 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || |||| | | | ||| | ||||||||||| | || || || || Sbjct 282288 GACACYATTGACAACGTTAAGTCCAAGA-TCCAAGACAAGGAAGGTATTCCTCCAGAYCA 282230 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || | | || ||||| || || || || |||||| || ||| | || || || Sbjct 282229 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAA 282170 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| ||||| ||||| |||||||| | || | ||| |||| || |||| Sbjct 282169 CATCCAAAAGGAATCCACTCTTCACTTAGTTTTRAGATTGAGAGGTGGTA 282120 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| |||| || || || ||||| | || || || |||| Sbjct 282804 ATGCAAATCTTCGTTAAGACTTTGACTGGTAAGACTATCACTCTTGAAGTCGAGTCGTCT 282745 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || |||| | | | ||| | ||||||||||| | || || ||||| Sbjct 282744 GACACCATTGACAACGTTAAGTCCAAGA-TCCAAGACAAGGAAGGTATTCCTCCAGACCA 282686 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || | | || ||||| || || || || |||||| || ||| | || || || Sbjct 282685 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAA 282626 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| ||||| ||||| |||||||| | || | ||| |||| || |||| Sbjct 282625 CATCCAAAAGGAATCCACTCTTCACTTAGTTTTGAGATTGAGAGGTGGTA 282576 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| |||| || || || || || | || |||||| | || Sbjct 282120 ATGCAAATCTTCGTTAAGACTTTGACTGGTAAGACCATTACTCTTGAGGTTGAATCTTCT 282061 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || |||| | | | ||| | ||||||||||| | || || ||||| Sbjct 282060 GACACCATTGACAACGTTAAGTCCAAGA-TCCAAGACAAGGAAGGTATTCCTCCAGACCA 282002 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || | | || ||||| || || || || |||||| || ||| | || || || Sbjct 282001 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAA 281942 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||| ||||| ||||| |||||||| | || | ||| |||| || ||| Sbjct 281941 CATCCAAAAGGAATCCACTCTTCACTTAGTTTTAAGATTGAGAGGTGGT 281893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766294130480