Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3 116 7e-21 seq1 84.2 4e-11 >seq3 Length=2118207 Score = 116 bits (128), Expect = 7e-21 Identities = 287/432 (66%), Gaps = 15/432 (3%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| |||||||| ||||| || || ||||| |||||| | || || || || |||||| Sbjct 1740958 GTTGCTTTTGCTGCCGTTGAGGGTATTTTCTTCAGTGGTTCTTTTGCTTCTATCTTCTGG 1740899 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| || ||| | |||| ||| | || | |||||||||||| || | || || Sbjct 1740898 TTAAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGAGTTGATCTGCAGAGAT 1740839 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | ||| ||||| || || || | || | ||| | | Sbjct 1740838 GAAGGTTTACATACTGACTTCGCCTGTTTGTTATTCTCCCA-------CTTGCAAAACAG 1740786 Query 102098 TCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 | ||| || ||| ||| | || ||||||| || ||| || || |||||||| Sbjct 1740785 ACCAGACCCAGTTATTGTTGAGAAGATCATCACTGAGGCTGTCAAGATCGAGCAAGAATT 1740726 Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213 |||| | | |||| || || |||| |||||| | |||||| |||| || Sbjct 1740725 CTTCACCGACGCTTTGCCAGTCTCCTTGTTGGGTATGAACGCTGAATTGATGTGCCAATA 1740666 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAAT 102271 | | ||||| || || || | | ||||| ||| |||| || || ||| || || Sbjct 1740665 CGTCGAATTCGTTGCCGACAGATTATTGATTGCTTTGGGTAACAAG--AAGATTTACAAC 1740608 Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331 || | |||||| ||| |||||||| || || ||| | | |||||| ||||| || Sbjct 1740607 GTCAACAACCCATTCGACTTCATGGAAAACATCTCCTTGGCTGGTAAGACTAACTTCTTC 1740548 Query 102332 GAAAAGAGAGTC 102343 || ||||||||| Sbjct 1740547 GAGAAGAGAGTC 1740536 >seq1 Length=3149860 Score = 84.2 bits (92), Expect = 4e-11 Identities = 140/196 (71%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 35256 GAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTG- 35314 ||||| || || | ||||||| ||||||| | || | ||||| ||||| ||| Sbjct 1359015 GAGGAATTATGCACGAACTCTTGTGGTTCGTTGCTGGAAGCACAGATGCCAAGTTGTTGA 1358956 Query 35315 GCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGA 35374 || || ||| | || | |||||| | | || || || || || || ||||||| || Sbjct 1358955 GCGAAAAAGGCG-TAAAGATCTGGGAAGGAAACGGATCTCGTGAGTTCTTGGACA--AGT 1358899 Query 35375 -GGGTTATAC-GATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTC 35432 ||||| || || | ||| || ||||||||||| || ||||||||||||||| | | Sbjct 1358898 TGGGTTTGACTGACCGTAGAGAAGGTGATTTGGGACCAGTTTACGGATTCCAATGGAGAC 1358839 Query 35433 ATTTTGGTGCTGAATA 35448 |||| || |||||||| Sbjct 1358838 ATTTCGGAGCTGAATA 1358823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583759098145