Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 7e-21
seq1 84.2 4e-11
>seq3
Length=2118207
Score = 116 bits (128), Expect = 7e-21
Identities = 287/432 (66%), Gaps = 15/432 (3%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| |||||||| ||||| || || ||||| |||||| | || || || || ||||||
Sbjct 1740958 GTTGCTTTTGCTGCCGTTGAGGGTATTTTCTTCAGTGGTTCTTTTGCTTCTATCTTCTGG 1740899
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| || ||| | |||| ||| | || | |||||||||||| || | || ||
Sbjct 1740898 TTAAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGAGTTGATCTGCAGAGAT 1740839
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | ||| ||||| || || || | || | ||| | |
Sbjct 1740838 GAAGGTTTACATACTGACTTCGCCTGTTTGTTATTCTCCCA-------CTTGCAAAACAG 1740786
Query 102098 TCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153
| ||| || ||| ||| | || ||||||| || ||| || || ||||||||
Sbjct 1740785 ACCAGACCCAGTTATTGTTGAGAAGATCATCACTGAGGCTGTCAAGATCGAGCAAGAATT 1740726
Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213
|||| | | |||| || || |||| |||||| | |||||| |||| ||
Sbjct 1740725 CTTCACCGACGCTTTGCCAGTCTCCTTGTTGGGTATGAACGCTGAATTGATGTGCCAATA 1740666
Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAAT 102271
| | ||||| || || || | | ||||| ||| |||| || || ||| || ||
Sbjct 1740665 CGTCGAATTCGTTGCCGACAGATTATTGATTGCTTTGGGTAACAAG--AAGATTTACAAC 1740608
Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331
|| | |||||| ||| |||||||| || || ||| | | |||||| ||||| ||
Sbjct 1740607 GTCAACAACCCATTCGACTTCATGGAAAACATCTCCTTGGCTGGTAAGACTAACTTCTTC 1740548
Query 102332 GAAAAGAGAGTC 102343
|| |||||||||
Sbjct 1740547 GAGAAGAGAGTC 1740536
>seq1
Length=3149860
Score = 84.2 bits (92), Expect = 4e-11
Identities = 140/196 (71%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 35256 GAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTG- 35314
||||| || || | ||||||| ||||||| | || | ||||| ||||| |||
Sbjct 1359015 GAGGAATTATGCACGAACTCTTGTGGTTCGTTGCTGGAAGCACAGATGCCAAGTTGTTGA 1358956
Query 35315 GCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGA 35374
|| || ||| | || | |||||| | | || || || || || || ||||||| ||
Sbjct 1358955 GCGAAAAAGGCG-TAAAGATCTGGGAAGGAAACGGATCTCGTGAGTTCTTGGACA--AGT 1358899
Query 35375 -GGGTTATAC-GATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTC 35432
||||| || || | ||| || ||||||||||| || ||||||||||||||| | |
Sbjct 1358898 TGGGTTTGACTGACCGTAGAGAAGGTGATTTGGGACCAGTTTACGGATTCCAATGGAGAC 1358839
Query 35433 ATTTTGGTGCTGAATA 35448
|||| || ||||||||
Sbjct 1358838 ATTTCGGAGCTGAATA 1358823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583759098145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |