Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq9 82.4 8e-11
>seq9
Length=507287
Score = 82.4 bits (90), Expect = 8e-11
Identities = 149/228 (65%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||||||||||| || || || ||||| ||||| || ||
Sbjct 282350 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 282409
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| | || ||||| || | || | | || || || |||||
Sbjct 282410 AGAGTTCTACCGTCTTCYAATTGCTTACCRGCGAARATYAAWCKYTGTTGRTCTGGAGGA 282469
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| ||||| ||||| ||| || || | | || | || || | | || ||
Sbjct 282470 ATACCTTCCTTGTCTTGGATCTTGGACTTRACGTTGTCAATRGTRTCRGAAGAYTCAACY 282529
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||| || || || || || ||||| |||||||||
Sbjct 282530 TCMARRGTAATGGTCTTACCRGTYAAWGTCTTRACGAAGATTTGCATA 282577
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||||||||||| || || || ||||| ||||| || ||
Sbjct 282578 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 282637
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| | || ||||| || | |||| | ||| || || |||||
Sbjct 282638 AGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 282697
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| ||||| ||||| ||| || || | | || | ||||| | | ||| ||
Sbjct 282698 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATGGTGTCAGACGACTCGACT 282757
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || | ||||| || ||||| || || ||||| |||||||||
Sbjct 282758 TCAAGAGTGATAGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCATA 282805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063882184800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |