Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 8e-11 >seq9 Length=507287 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/228 (65%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||||||||||| || || || ||||| ||||| || || Sbjct 282350 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 282409 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| | || ||||| || | || | | || || || ||||| Sbjct 282410 AGAGTTCTACCGTCTTCYAATTGCTTACCRGCGAARATYAAWCKYTGTTGRTCTGGAGGA 282469 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||| || || | | || | || || | | || || Sbjct 282470 ATACCTTCCTTGTCTTGGATCTTGGACTTRACGTTGTCAATRGTRTCRGAAGAYTCAACY 282529 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || || || || || ||||| ||||||||| Sbjct 282530 TCMARRGTAATGGTCTTACCRGTYAAWGTCTTRACGAAGATTTGCATA 282577 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||||||||||| || || || ||||| ||||| || || Sbjct 282578 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 282637 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| | || ||||| || | |||| | ||| || || ||||| Sbjct 282638 AGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 282697 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||| || || | | || | ||||| | | ||| || Sbjct 282698 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATGGTGTCAGACGACTCGACT 282757 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | ||||| || ||||| || || ||||| ||||||||| Sbjct 282758 TCAAGAGTGATAGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCATA 282805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063882184800