Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq3 149 6e-31 >seq3 Length=2118207 Score = 149 bits (164), Expect = 6e-31 Identities = 477/731 (65%), Gaps = 12/731 (2%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||||| ||||| || || || |||||||| ||||| ||| || || ||| Sbjct 1740522 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTT 1740581 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACT-TTATCACAACCTAGTTCTAATAA 13487 ||||| || |||||||| || |||||| | | | || | ||| | | | || Sbjct 1740582 TCCATGAAGTCGAATGGGTT-GTTGACGTTGTAAATCTTCTTGTTACCCAAAGCAATCAA 1740640 Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 |||||| || |||| || || | ||||| |||| || ||| |||||||| | | Sbjct 1740641 TAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAGCGTTCATACCCAACAA 1740700 Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607 || || | | || || ||||||| || || |||||||| | || || Sbjct 1740701 GGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTGACAGCCTCAGTGATGAT 1740760 Query 13608 AATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA--AACACGCA 13665 ||| || ||| | | | | | |||| | || | ||| | |||| || Sbjct 1740761 CTTCTCAACAATAAC--TGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACAAACAGGCG 1740818 Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725 || ||| ||| | || |||||||| | || | || || || || || || |||||| Sbjct 1740819 AAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAGAAAGTCAAACCTGGC 1740878 Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785 ||||| |||| || |||||||| || || | ||| || || || ||||| || ||| Sbjct 1740879 ATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCACTGAAGAAAATACCC 1740938 Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCAT 13845 ||||| |||||||| || | || || ||| || ||| | || | | || || |||||| Sbjct 1740939 TCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCGTCGTCAGAGATCCAT 1740998 Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TCGATTGCATTGAATA- 13903 | ||||| |||| || ||| | || || | |||| || || |||||||| | Sbjct 1740999 CTCAAGGCCCAGTCAGCCTTCTTTCTGAT-GCATGGAATGTTGTCAATAGCATTGAAAAG 1741057 Query 13904 -AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 13962 || |||| | || ||| || ||| || ||||| | || || | || Sbjct 1741058 GAAGTCAGCTTCCTTAGGGTCCTT--AACGTAAGTGTCAATTAACAAAGAGTAGGTCTCG 1741115 Query 13963 GAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14022 ||||| |||||||| || || || ||||| || ||||| | ||||||| ||| Sbjct 1741116 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGG 1741175 Query 14023 ACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAA 14082 ||||| | | || | || ||||||| || || |||||||| ||| || || || Sbjct 1741176 ACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCGAAG 1741235 Query 14083 AATGCCAATAT 14093 || ||||| || Sbjct 1741236 AAAGCCAAGAT 1741246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588686335160