Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3 188 1e-42 seq5 111 2e-19 >seq3 Length=2118207 Score = 188 bits (208), Expect = 1e-42 Identities = 712/1105 (64%), Gaps = 14/1105 (1%) Strand=Plus/Plus Query 71804 TCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATT 71863 |||| |||||||| |||||||| || | || || |||||||| |||||| |||||| | Sbjct 1784917 TCTTCTTGTTACAGGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCCT 1784976 Query 71864 CTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT--TTCTCT 71921 | | || || | ||| | | ||||||| | | ||| || ||||| |||||| Sbjct 1784977 CCAAGATGGCGTACCACAACTTTTGAGCCTTGACGGTG--CTTCTACCTCTTCCTTCTCT 1785034 Query 71922 TTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCAT-TGTCTAATCCAGGAC 71980 ||||| || ||||| |||||| ||||| || || | | || | || || ||| Sbjct 1785035 CTCGTAACGTTCGTATAACTCTTCGAATTCGTCACCGTAAACTTCTGGC-AAGCCTGGAG 1785093 Query 71981 ATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGAT 72040 ||| || ||| | | | | ||| || |||| | | |||| ||||| || | || Sbjct 1785094 CTTCGTTTGGAGAGAAAAGAGTCCATTCACCATTCTGTTCCACTCTCTTCATGAACAAAT 1785153 Query 72041 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 72100 | |||||||| | |||| || | |||||| | ||| || || || || ||||| Sbjct 1785154 CTGGAATCCACAAAGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTCT 1785213 Query 72101 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 72160 || | | || | ||| | | || || | ||||| || |||||||| | ||| | | Sbjct 1785214 TTCTGATGTCAATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAG 1785273 Query 72161 CTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 72220 | || || || ||||| || || || || | ||||||||| ||||| || | || | | Sbjct 1785274 CACCTGGACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAA 1785333 Query 72221 ACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCAC 72280 ||||||||||||||| ||||| | ||| || || || | || || ||| | | || Sbjct 1785334 CCATTGGAATAATACCGTTGGAGGTACCGTTAGTACCAGCAATGTAAGCACCAGTAGAAC 1785393 Query 72281 GAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 72340 | || ||| ||| | ||| || || || || | || || || || || || | Sbjct 1785394 GGATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCT 1785453 Query 72341 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 72400 | || || || || || || || ||| || ||| |||| | || ||||| || Sbjct 1785454 TCAAGGTGTCGTAAATACCATCAATAGAGTCGTCCTTCATTGCGACAAGGAAACAAGAAG 1785513 Query 72401 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 72460 ||||||| || || || || || || || ||||||||| |||| || || | Sbjct 1785514 ACATTTGTGGAGATGGGGTACCAGCGTTGAACAAAGTAGGAGAACCGTGGGTGAAGAAAC 1785573 Query 72461 TTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCT 72519 || ||||| | ||||| | || || | || || || || | || || || Sbjct 1785574 GTTGAGACATCAAGTTGTAAGATTCGATGACCTTCTCGATGTCGTCACCG-TGAATACCA 1785632 Query 72520 ACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAAC 72579 | | || | ||| | || ||| || ||||||||| ||| ||| || | || Sbjct 1785633 ATGGAAACTCTCATGATCAAATGTTGTGGTCTTTCAGCGACCTTACCGTTGACACGTAAA 1785692 Query 72580 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGT 72637 | || ||| | |||||||| || ||||| || |||||||| ||||| || || |||| Sbjct 1785693 AGATACGATCTCTCCAAAGTCTTGAAACCGAAGTAGTTGTAGTTGAAA--TCACGGTCGT 1785750 Query 72638 AAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTG 72697 | | ||| |||| || | | ||| | ||| | ||||| ||| || | Sbjct 1785751 ACACAATGGCCGAGTTCAACTCGTCCGAGTGCTTGAGGATGATATCGTAGGTTTCTCTGG 1785810 Query 72698 AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCA 72757 | || || || || || || | || || |||| |||| | | || |||| || Sbjct 1785811 AGATCATAGGGGAGTGCAATCCGGTCTTTGGGTTAATGTAGTCGTACAACTCCTTGGACA 1785870 Query 72758 CTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTA 72817 | | || | || | |||| |||||| | || || || || ||||| || || | Sbjct 1785871 CGGCCGAGTATTGCTTAGTGGTTTGCTTGTGCAAGTTGGAGACAGCAATTCTAGCAGCGA 1785930 Query 72818 GAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCTGCTGCCAGAGTG 72876 |||| || || |||||||| || || || || ||| || | || || |||| || Sbjct 1785931 GAATCGCGTAGTCTGGATGGATGGTGGT-CATGTAGGCGGCAGTCTCGGCAGCCAAGTTG 1785989 Query 72877 TCCAATTCTACCGTTGTTACTCCAT 72901 ||||| || | || || || |||| Sbjct 1785990 TCCAACTCGATGGTGGTAACACCAT 1786014 Score = 187 bits (206), Expect = 3e-42 Identities = 578/888 (65%), Gaps = 26/888 (3%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| |||| || | || ||||| || |||||||| || |||| || || ||| Sbjct 1740522 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTT 1740581 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||| || || || ||| | || || ||||| || || ||||| || |||| Sbjct 1740582 TCCATGAAGTCGAATGGGTTGTTGACGTTGTAAATCTTCTTGTTACCCAA---AGCAATC 1740638 Query 41894 AAT---CTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 41950 ||| || || || | |||||| | ||| ||||| |||| ||||| || | Sbjct 1740639 AATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAGCGTTCATACCCAAC 1740698 Query 41951 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 42010 | ||||| | ||| | || | |||||||| || || ||| || || || || Sbjct 1740699 AAGGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTGACAGCCTCAGTGAT- 1740757 Query 42011 ATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT-----AAATGTTTAAACATCAAAC 42065 |||||| || | ||| ||| | | || || || | ||||| Sbjct 1740758 ---GATCTT-CTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACAAAC 1740813 Query 42066 ATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTC 42125 | ||||| || || | ||| |||||||| | || || || ||||| || || | | Sbjct 1740814 AGGCGAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAGAAAGTCAAAC 1740873 Query 42126 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGA 42185 | ||||| | || | ||| || | ||| || ||||| ||||| || ||| ||||| | Sbjct 1740874 CTGGCATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCACTGAAGAAAA 1740933 Query 42186 TTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT----GTCATGT 42241 | || || || || ||||| |||| | ||| || || | ||| || |||| Sbjct 1740934 TACCCTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGC-CTCGTCGTCAGAG 1740992 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 ||||| | ||||| || ||||||||| | | || || || | || || ||||| Sbjct 1740993 ATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATAGCATTG 1741052 Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361 || || ||| ||| ||| || ||||| || || || || || | | || | Sbjct 1741053 AAAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAACAAAGAGTAGGTC 1741112 Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421 || || ||||||||||| || || || || ||||||||||| |||| || | || Sbjct 1741113 TCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATT 1741172 Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481 || || || | | | || || | || || ||||| || || |||||| ||| || Sbjct 1741173 TGGACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCG 1741232 Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTATTCCA 42537 || || ||||| | | | || || ||| |||||| | |||| | || ||||| Sbjct 1741233 AAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTC-TTGTTCAACTTTTGGTTCCA 1741291 Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597 ||| || |||| ||| | || | |||||| | ||||| || || ||||| ||||| Sbjct 1741292 GTCAGTGGTATCCTTACTCAAGTCAATTTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTT 1741351 Query 42598 TTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || ||||| | ||||| || || || | |||||||| | ||| || Sbjct 1741352 CTTGTACATTTGCCAGACTTCGTGGTACTTGATTGGGAAGAGAACGAA 1741399 >seq5 Length=1730773 Score = 111 bits (122), Expect = 2e-19 Identities = 517/809 (64%), Gaps = 10/809 (1%) Strand=Plus/Minus Query 71812 TTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATC 71871 ||||| |||||||| || | || | ||| ||| ||||| | || ||||||| || Sbjct 1418198 TTACAGGCATCCTTGTATAACATGTATGGACCACCTGTTTCTGTTTGTGATTCTAAGATT 1418139 Query 71872 GCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTC--TTTCGTATT 71929 || | ||| | | |||| || | || ||| || ||||| ||| | |||||| Sbjct 1418138 GCATGCCACAACTTTTGAGCTTTGACTAC-TTCA-GTTGCTCTTCCCTCGCTCTCGTATC 1418081 Query 71930 GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGT-CTAATCCAGGACATTCATTC 71988 | |||| || | || || || || || || | | |||| |||||| |||| Sbjct 1418080 TTTTATACAACTCAACAAATTCTTCCCCATAA-CAGTCTGCTAAACCAGGAGCCTCATCT 1418022 Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 ||| | | || ||||| || ||| || ||||| || ||| || | |||||||||| Sbjct 1418021 GGAGAAAATAAAGACCATACTTCATTATTCCGTACTCTTTCCATGAACAAATCAGGAATC 1417962 Query 72049 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 || | | | ||||| |||| ||||| | || || || || ||||| || | Sbjct 1417961 CATAACCCAAAAAATAAGTCTCGCGTTCTGAGTTCTTCCTTGCCGTGGTTCTTCTTCAAG 1417902 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 || | || | | | | ||||| ||||| |||||||| |||||||| | | || || Sbjct 1417901 TCCAAGATCTCGAATACGTCAGAGTGCCATGGTTCCAAATATATGGCGAAGGCACCTGGT 1417842 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 | |||||| ||||||||||| | || || || || | ||| | ||| | | ||| ||| Sbjct 1417841 CTTTTGTTCCCTCCCTGATCAACATACCTCGCCGTATCATTGAATACTTTAAGCATAGGA 1417782 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATAT-AGCTTCCACTGGCACGAATATT 72287 | | ||| | | | || || || | || ||| | ||| ||| | | ||||| Sbjct 1417781 ACCAATCCACTTGCCGTTCCGTTAGTACTGGCGATGTGAGC-TCCGTGTCCTCTTATATT 1417723 Query 72288 GCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 72347 | || || |||||||| |||| | || || ||||| || | | || ||| Sbjct 1417722 GTGAACATGTAAGCCTATTCCTCCTGACGCCTTTGAAATTAAAGCTGCTTTATGTAGCGT 1417663 Query 72348 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 72407 | |||||||| || || |||||| ||| | | ||| || |||| | Sbjct 1417662 TTTGTAGATGCCGTCGATGGAGTCATCCTCCATTGCTATCAAAAAGCATGATGACAAGTA 1417603 Query 72408 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 72467 || | ||||| ||||| | ||||||||||| || || |||| | || | ||| Sbjct 1417602 GTTATATTCCGTTCCAGCATTGTACAAGGTAGGAGATGCATGGATAAAGTACTTATTAGA 1417543 Query 72468 CAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGAC 72527 || || | ||||||||| | | | ||| || | | ||| || || | || || Sbjct 1417542 CATTAATTCGTACGTCTCGACAACGTCTTCCATGTTGTCTCCATGGATGCCAATAGCTAC 1417483 Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTA-TTTTCAACAAGTAGG 72586 | | ||||| ||||| ||||| | ||| ||| | | |||||| || || | Sbjct 1417482 CCTTAGAAACATGAATTGAGGGGTTTCAGCTATC-TGTCCGTCACATTTCAATAAATACG 1417424 Query 72587 ATTTTTCCAAAGTTTTAAAACCAAAATAG 72615 |||| || || || |||| ||||||||| Sbjct 1417423 ATTTCTCTAATGTCTTAATTCCAAAATAG 1417395 Score = 84.2 bits (92), Expect = 3e-11 Identities = 131/182 (72%), Gaps = 8/182 (4%) Strand=Plus/Minus Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGA-TCTTGTGCT--TCCGGGCTA 71490 || |||| || ||||||||||| |||| |||| | | |||| || || | | Sbjct 1418603 GCGCCATGGTATATGGTTTCGAAGATCTGGATATTCAAAGTCTTAGCCTCTTCAGAG--- 1418547 Query 71491 TCAAATGGATAAT-TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGAT 71549 |||||||| |||| |||| | |||| ||| || |||||||| || || | | | || Sbjct 1418546 TCAAATGG-TAATCTTAATTCTAGAAACAAGTCCGCCAATCCTTGGACTCCCACAGCTAT 1418488 Query 71550 AGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTAT 71609 ||||||||||||||| ||||||| ||||| | || || ||||| | |||| ||||| Sbjct 1418487 AGGTCTGTGTCTCTTGTTAGAAACTTCAGTTCCTTCGATCGGATATTTCGTAATGTCTAT 1418428 Query 71610 AA 71611 || Sbjct 1418427 AA 1418426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139040604440