Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 131 3e-26 >seq5 Length=1730773 Score = 131 bits (144), Expect = 3e-26 Identities = 181/252 (72%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||| ||||||||||| |||||||||||||||||| | | |||| | Sbjct 1030655 AGATCT-TGAGAGACAACATCCAAGGTATCACCAAGCCAGCTATCAGAAGATTGGCCAGA 1030713 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| | |||| || |||| ||||| | | | ||| |||||| Sbjct 1030714 AGAGGTGGTGTTAAGCGTATTTCTGCTTTAATCTACGAAGAAGTCAGAGTTGTCTTGAAG 1030773 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 |||| | ||| ||||||| ||||| || ||| || ||||||||||| | ||| Sbjct 1030774 TCCTTCTTGGAGAACGTTATCAGAGATGCCGTCACCTACACTGAGCACGCTAAGAGAAAG 1030833 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || ||||| || |||| | ||||| || ||||| | ||||| | | | || ||| Sbjct 1030834 ACCGTCACTTCTTTGGACGTTGTCTACGCCTTGAAGAGACAAGGAAGAACCTTGTACGGT 1030893 Query 16688 TTTGGAAGTTAA 16699 || ||| ||||| Sbjct 1030894 TTCGGAGGTTAA 1030905 Score = 127 bits (140), Expect = 3e-25 Identities = 180/252 (71%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||| ||||||||||| || ||||||||||| ||| | | |||| | Sbjct 589691 AGATCT-TAAGAGACAACATCCAAGGTATTACCAAGCCAGCCATCAGAAGATTGGCCAGA 589633 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| | |||| ||| |||| ||||| | | | ||| |||||| Sbjct 589632 AGAGGTGGTGTTAAGCGTATTTCTGCTTTGATCTACGAAGAAGTCAGAGTTGTCTTGAAG 589573 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 |||| | ||| ||| ||| |||||| || || ||||||||||| || | ||| Sbjct 589572 TCCTTCTTGGAGAACGTCATCAGAGATGCTGTCACTTACACCGAGCACGCCAAGAGAAAG 589513 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || ||||| ||| |||| | ||||| || ||||| | ||||| | | | |||||| Sbjct 589512 ACCGTCACTTCCTTGGACGTTGTCTACGCCTTGAAGAGACAAGGTAGAACCTTGTATGGT 589453 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 589452 TTCGGTGGTTAA 589441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075182628167