Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq3 158 1e-33 >seq3 Length=2118207 Score = 158 bits (174), Expect = 1e-33 Identities = 361/539 (67%), Gaps = 6/539 (1%) Strand=Plus/Plus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 ||||| || ||||| ||||| || ||||| || || ||||| || |||| || || | Sbjct 1740522 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTT 1740581 Query 21245 TCCATAAAATCAAATGGATT-TTCAGATT-TAAATATT-TTATTACAACCCAGTTCTGAT 21301 ||||| || || ||||| || || | || ||||| || || |||| ||| | Sbjct 1740582 TCCATGAAGTCGAATGGGTTGTTGACGTTGTAAATCTTCTTGTTAC---CCAAAGCAATC 1740638 Query 21302 AATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATC 21361 |||||||| || || || ||||| | ||||| ||||| |||||| |||||||| | | Sbjct 1740639 AATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAGCGTTCATACCCAAC 1740698 Query 21362 AATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATT 21421 || || || | ||| | || || || || || || ||| || ||| || Sbjct 1740699 AAGGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTGACAGCCTCAGTGATG 1740758 Query 21422 ATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCA 21481 || || | || || || | || || || | |||||| || Sbjct 1740759 ATCTTCTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACAAACAGGCG 1740818 Query 21482 AAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGC 21541 || ||| ||| ||||||||||| || | || || ||||| || || || ||||| ||| Sbjct 1740819 AAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAGAAAGTCAAACCTGGC 1740878 Query 21542 ATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCC 21601 || || |||||||| |||||||| || || || ||||| | || |||||||| ||| Sbjct 1740879 ATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCACTGAAGAAAATACCC 1740938 Query 21602 TCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCAT 21661 |||||||||||||| |||||||||| ||||||| | | || | || | |||||| Sbjct 1740939 TCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCGTCGTCAGAGATCCAT 1740998 Query 21662 TTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAG 21720 | ||||| | ||||| | | | || || ||| | |||||||| || ||||| Sbjct 1740999 CTCAAGGCCCAGTCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATAGCATTGAAAAG 1741057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900673673560