Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3 188 2e-42 seq1 95.1 3e-14 >seq3 Length=2118207 Score = 188 bits (208), Expect = 2e-42 Identities = 726/1122 (65%), Gaps = 30/1122 (3%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | ||||| |||||| ||| || || | ||| |||| ||| | | | |||| Sbjct 1785724 TTCGGTTTCAAGACTTTGGAGAGATCGTATCTTTTACGTGTCAACGGTAAGGTCGCTGAA 1785665 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 | || || ||| || | ||| | ||| | |||||||| || | || | || Sbjct 1785664 AGACCACAACATTTGATCATGAGAGTTTCCATTGGTATTCACGGTGACGACATCGAGAAG 1785605 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTC---GTGTATTCACGCACGCCACGCCAACA 363567 | || ||| | || || ||| | || ||| || | ||||| |||| | || || Sbjct 1785604 GTCATCGAATCTTACAA-CTTG-ATGT-CTCAACGTTTCTTCACCCACGGTTCTCCTACT 1785548 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627 ||| ||| ||||| || | |||||| ||||||||||| || ||| | ||||||| Sbjct 1785547 TTGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCAATGAAG 1785488 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 ||||| || || || ||||| | ||||| | |||| ||||| | |||||||||| | Sbjct 1785487 GACGACTCTATTGATGGTATTTACGACACCTTGAAGACCTGTGCCTTGATTTCCAAGAGT 1785428 Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746 || || || |||||| | || ||||| | ||| | || | ||||||| || Sbjct 1785427 GCTGGTGGTATTGGTTTGCACATTCACAACATCCGTTCTACTG-GTGCTTACATTGCTGG 1785369 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| || || | |||| ||| ||||||| || |||| ||||| || Sbjct 1785368 TACTAACGGTACCTCCAACGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTGCTAG 1785309 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||||| ||||| ||||| ||||| ||| || ||||| |||| | ||||| Sbjct 1785308 ATACGTTGACCAAGGTGGTAACAAGCGTCCAGGTGCTTTTGCCTTGTACTTGGAGCCATG 1785249 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAATTGC 363925 || || || || || || || |||| || | || || ||| || || || ||| | Sbjct 1785248 GCACGCAGACATCTTCGACTTCATTGACATCAGAAAGAATCAC-GGTAAGGAAGAAATCA 1785190 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG--- 363982 | || | ||| ||||| || | ||| || | || || |||||| | |||| Sbjct 1785189 GAGCTAGAGATTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGAGTGGAAC 1785130 Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC-GATGTA 364041 || ||| ||| ||| | || || | ||| ||||| |||||| ||| || || || Sbjct 1785129 AGAATGGT--GAA-TGGACTCTTTTCTCTCCAAACGAAGCTCCAGG-CTTGCCAGAAGTT 1785074 Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101 | |||||||| | | | |||||||| || || || |||| | | | | Sbjct 1785073 TACGGTGACGAATTCGAAGAGTTATACGAACGTTACGAGAGAGAAGGAAGAGGTAGAAGC 1785014 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 || | || || ||| | |||| |||||| |||| | |||| ||| || || || Sbjct 1785013 ACCGTCAAGGCTCAAAAGTTGTGGTACGCCATCTTGGAGGCTCAGACTGAAACCGGTACT 1784954 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || | ||||||||||| ||| | || ||| ||| |||||||| || || | |||| | Sbjct 1784953 CCTTTCATGTTGTACAAGGATGCCTGTAACAAGAAGACCAACCAGAAGAACTTGGGTATA 1784894 Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 ||| || ||| | ||| ||||| | || ||| || |||| || || ||| Sbjct 1784893 ATTAAGTCTTCTAACTTGTGTTGTGAGATCGTCGAGTACTCCTCTCCAGAGGAAGTTGCT 1784834 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT---TGTAAAAGATG----GTACTTT 364334 || ||||| | || || ||||| | || | || || || |||| || || Sbjct 1784833 GTCTGTAATTTGGCCTCTATCGCTTTGCCATCTTTTGCTGAGAAGGATGACAAGTCTTTG 1784774 Query 364335 TG--ACCAC---CAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAG 364389 || || || || | | ||||||| ||| | || ||| | || | ||||| Sbjct 1784773 TGGTACAACTTTGAGAAGTTGCATGACGTCACCAAGTCTGTTACCCGTAACTTGAACAAG 1784714 Query 364390 GTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGC 364449 | ||||||| || || || ||| |||| ||||||||| | ||||| | | | || | Sbjct 1784713 ATCATCGACAGAAACTACTACCCAGTTCCAGAAGCCGAGAGATCTAACAAGAGAAATAGA 1784654 Query 364450 CCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATG 364491 || |||| | |||||||| || | || ||| ||| ||| Sbjct 1784653 CCAATTGCCTTGGGTGTACAAGGTTTGGCCGACACTTTCATG 1784612 >seq1 Length=3149860 Score = 95.1 bits (104), Expect = 3e-14 Identities = 143/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 111351 GGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCA 111410 |||||| | | ||||| ||||||| || ||||| ||| |||| || | ||| | Sbjct 1359013 GGAATTATGCACGAACTCTTGTGGTTCGTTGCTGGAAGCACAGATGCCAA-GTTGTTG-A 1358956 Query 111411 GCAAAAAATG--TAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTG 111468 || ||||| | |||| || ||||| ||||| ||||| ||||| || | || ||||| Sbjct 1358955 GCGAAAAAGGCGTAAAGATCTGGGAAGGAAACGGATCTCGTGAGTTCTTGGACA-AGTTG 1358897 Query 111469 GTCTTGTC-GACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCAC 111527 | ||| | ||| |||||||||| | ||||||||||||||||| |||||| | || Sbjct 1358896 GGTTTGACTGACCGTAGAGAAGGTGATTTGGGACCAGTTTACGGATTCCAATGGAGACAT 1358837 Query 111528 TTTGGTGCAGACTACAA 111544 || || || || ||||| Sbjct 1358836 TTCGGAGCTGAATACAA 1358820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353282714858