Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq3 194 2e-44
>seq3
Length=2118207
Score = 194 bits (214), Expect = 2e-44
Identities = 596/905 (66%), Gaps = 25/905 (3%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| |||||| |||||||| || | ||| | || || ||||| || ||||| || |
Sbjct 1740509 CATGACACCAGCCTTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGC 1740568
Query 92850 CAAAGATATCGAATTCACT--AGT-GATTGGATTCTTGGCGTTATAA---TACTTTTCAC 92903
||| || || | ||| | ||| || ||| || ||| |||| ||| | ||| | ||
Sbjct 1740569 CAAGGAGAT-GTTTTCCATGAAGTCGAATGGGTTGTTGACGTTGTAAATCTTCTTGTTAC 1740627
Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963
| ||| | ||||||||| || || || ||||| | ||| || ||||||| |||
Sbjct 1740628 C---CAAAGCAATCAATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAG 1740684
Query 92964 AATTCATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACA 93022
||||| || | ||| | || || | ||||||||| ||||| |||| ||||||
Sbjct 1740685 CGTTCATACCCAACAAGGAG-ACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTG 1740743
Query 93023 ACGGCTTCTTTCAAGAT-TTCTATTACTCTA-CTA--TTTGGTGGTTTTTGTACGACATA 93078
|| || || | | ||| |||| || || || | |||| ||||| | | |
Sbjct 1740744 ACAGCCTCAGTGATGATCTTCTCA-ACAATAACTGGGTCTGGTCTGTTTTGCAAGTGGGA 1740802
Query 93079 ATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATT 93138
| | | || || || ||||| |||||||||||||| |||| | |||||||||||
Sbjct 1740803 ---GAATAACAAACAGGCGAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATT 1740859
Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198
| ||| || |||||||| | || |||| ||||| | ||| || || |||||||||
Sbjct 1740860 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGA 1740919
Query 93199 ACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC 93258
|||| || || ||||| || ||||| ||||| || || | | ||| | || ||
Sbjct 1740920 ACCACTGAAGAAAATACCCTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGC 1740979
Query 93259 GGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318
| ||||||| | || ||||| || || || || | || || || | |||
Sbjct 1740980 CTCGTCGTCAGAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATGCATGG-AATGT 1741038
Query 93319 T-TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTA 93377
| || ||||| || || ||| | || || | | || | ||| || || ||||
Sbjct 1741039 TGTCAATAGCATTGAAAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTA 1741098
Query 93378 ACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATC 93437
||| ||| || | || || || | || ||||| ||||||||| |||||||||||
Sbjct 1741099 ACAAAGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACT 1741158
Query 93438 TAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATAC 93497
| ||||| | || || || || ||| || |||| || | || || ||||| ||||
Sbjct 1741159 TGGCTTCTGGAATTTGGACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATAC 1741218
Query 93498 CATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA 93557
| || || || || || |||||||| ||| | || || | | | || | | || |
Sbjct 1741219 CGTCAGAGGCAGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCA 1741278
Query 93558 GCTT---ATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACG 93614
||| | ||| || | ||| || | || | ||||||| | ||||| || |
Sbjct 1741279 ACTTTTGGTTCCAGTCAGTGGTATCCTTACTCAAGTCAATTTCTTCGGCGGTCCAGAAGG 1741338
Query 93615 ATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAA 93674
| ||||| || || |||||||| | ||| | || || || | ||||| || | || |
Sbjct 1741339 AGGCTTCGGCCTTCTTGTACATTTGCCAGACTTCGTGGTACTTGATTGGGAAGAGAACGA 1741398
Query 93675 AACGA 93679
|||||
Sbjct 1741399 AACGA 1741403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860667745560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |