Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 194 2e-44 >seq3 Length=2118207 Score = 194 bits (214), Expect = 2e-44 Identities = 596/905 (66%), Gaps = 25/905 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| |||||||| || | ||| | || || ||||| || ||||| || | Sbjct 1740509 CATGACACCAGCCTTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGC 1740568 Query 92850 CAAAGATATCGAATTCACT--AGT-GATTGGATTCTTGGCGTTATAA---TACTTTTCAC 92903 ||| || || | ||| | ||| || ||| || ||| |||| ||| | ||| | || Sbjct 1740569 CAAGGAGAT-GTTTTCCATGAAGTCGAATGGGTTGTTGACGTTGTAAATCTTCTTGTTAC 1740627 Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963 | ||| | ||||||||| || || || ||||| | ||| || ||||||| ||| Sbjct 1740628 C---CAAAGCAATCAATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAG 1740684 Query 92964 AATTCATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACA 93022 ||||| || | ||| | || || | ||||||||| ||||| |||| |||||| Sbjct 1740685 CGTTCATACCCAACAAGGAG-ACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTG 1740743 Query 93023 ACGGCTTCTTTCAAGAT-TTCTATTACTCTA-CTA--TTTGGTGGTTTTTGTACGACATA 93078 || || || | | ||| |||| || || || | |||| ||||| | | | Sbjct 1740744 ACAGCCTCAGTGATGATCTTCTCA-ACAATAACTGGGTCTGGTCTGTTTTGCAAGTGGGA 1740802 Query 93079 ATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATT 93138 | | | || || || ||||| |||||||||||||| |||| | ||||||||||| Sbjct 1740803 ---GAATAACAAACAGGCGAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATT 1740859 Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198 | ||| || |||||||| | || |||| ||||| | ||| || || ||||||||| Sbjct 1740860 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGA 1740919 Query 93199 ACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC 93258 |||| || || ||||| || ||||| ||||| || || | | ||| | || || Sbjct 1740920 ACCACTGAAGAAAATACCCTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGC 1740979 Query 93259 GGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318 | ||||||| | || ||||| || || || || | || || || | ||| Sbjct 1740980 CTCGTCGTCAGAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATGCATGG-AATGT 1741038 Query 93319 T-TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTA 93377 | || ||||| || || ||| | || || | | || | ||| || || |||| Sbjct 1741039 TGTCAATAGCATTGAAAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTA 1741098 Query 93378 ACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATC 93437 ||| ||| || | || || || | || ||||| ||||||||| ||||||||||| Sbjct 1741099 ACAAAGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACT 1741158 Query 93438 TAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATAC 93497 | ||||| | || || || || ||| || |||| || | || || ||||| |||| Sbjct 1741159 TGGCTTCTGGAATTTGGACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATAC 1741218 Query 93498 CATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA 93557 | || || || || || |||||||| ||| | || || | | | || | | || | Sbjct 1741219 CGTCAGAGGCAGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCA 1741278 Query 93558 GCTT---ATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACG 93614 ||| | ||| || | ||| || | || | ||||||| | ||||| || | Sbjct 1741279 ACTTTTGGTTCCAGTCAGTGGTATCCTTACTCAAGTCAATTTCTTCGGCGGTCCAGAAGG 1741338 Query 93615 ATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAA 93674 | ||||| || || |||||||| | ||| | || || || | ||||| || | || | Sbjct 1741339 AGGCTTCGGCCTTCTTGTACATTTGCCAGACTTCGTGGTACTTGATTGGGAAGAGAACGA 1741398 Query 93675 AACGA 93679 ||||| Sbjct 1741399 AACGA 1741403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860667745560