Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3 183 6e-41 seq9 168 1e-36 >seq3 Length=2118207 Score = 183 bits (202), Expect = 6e-41 Identities = 170/216 (79%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| | |||||||| || |||||||| || || || || || || || ||| Sbjct 53427 AAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCT 53368 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || |||||||| || ||||| || | |||||||||||| |||||||| ||||||||||| Sbjct 53367 TCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCC 53308 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | |||||| || |||||||| | || || ||||||||||| ||||| Sbjct 53307 TGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTC 53248 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || | ||||||||||| || |||||| || Sbjct 53247 TTACCTGTTAAAGTCTTGACGAAAATTTGCATTTTG 53212 >seq9 Length=507287 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || ||||| || ||||||||||| || || || || || || || || Sbjct 282592 CAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTC 282651 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| |||||||| || | |||||||||||| || ||||| ||||||||||| Sbjct 282652 TTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 282711 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||| ||| || |||||||| | || || ||||| | ||||| || Sbjct 282712 TTGGATCTTGGACTTAACGTTGTCAATGGTGTCAGACGACTCGACTTCAAGAGTGATAGT 282771 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||||| || ||||| Sbjct 282772 CTTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282804 Score = 167 bits (184), Expect = 4e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| || ||||| || ||||||||||| || || || || || || || ||| Sbjct 281909 AAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCT 281968 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| ||||| |||||||| || | |||||||||||| || ||||| |||||||||||| Sbjct 281969 TCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCT 282028 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | ||| ||| || |||||||| | ||||| || || | || ||||| Sbjct 282029 TGGATCTTGGACTTAACGTTGTCAATGGTGTCAGAAGATTCAACCTCAAGAGTAATGGTC 282088 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||||| || ||||| Sbjct 282089 TTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282120 Score = 165 bits (182), Expect = 2e-35 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| || ||||| || ||||||||||| || || || || || || || ||| Sbjct 282137 AAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCT 282196 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| ||||| |||||||| || | ||||||||| || || ||||| |||||||||||| Sbjct 282197 TCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGRTCTGGAGGAATACCTTCCTTGTCT 282256 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | ||| ||| || || ||||| | ||||| || || | || ||||| Sbjct 282257 TGGATCTTGGACTTAACGTTGTCAATRGTGTCAGAAGATTCAACYTCAAGAGTAATGGTC 282316 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||||| || ||||| Sbjct 282317 TTACCAGTCAAAGTCTTRACGAAGATTTGCAT 282348 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| || ||||| || ||||||||||| || || || || || || || ||| Sbjct 282821 AAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCT 282880 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || ||||| || ||||| || | | |||||||| || ||||| |||||||||||| Sbjct 282881 TCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCT 282940 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | ||||||| || ||||| || | || || ||||||||||| ||||| Sbjct 282941 TGGATCTTGGACTTGACGTTGTCAATGGTATCGGAAGACTCAACTTCCAAGGTAATGGTC 283000 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | ||||| ||||| || |||||| Sbjct 283001 TTACCGGTTAATGTCTTAACGAAGATTTGCATT 283033 Score = 154 bits (170), Expect = 3e-32 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || ||||| || ||||||||||| || || || || || || || || Sbjct 282364 CAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTC 282423 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || ||||| || | | ||||| || || ||||| ||||||||||| Sbjct 282424 TTCYAATTGCTTACCRGCGAARATYAAWCKYTGTTGRTCTGGAGGAATACCTTCCTTGTC 282483 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||| ||| || || || || | || || || || | || ||||| Sbjct 282484 TTGGATCTTGGACTTRACGTTGTCAATRGTRTCRGAAGAYTCAACYTCMARRGTAATGGT 282543 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||||| || ||||| Sbjct 282544 CTTACCRGTYAAWGTCTTRACGAAGATTTGCAT 282576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622181114680