Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq9 109 5e-19 >seq9 Length=507287 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||| ||||| || || | || ||||| ||||| |||||||| || Sbjct 282803 ATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 282862 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | | ||||| | ||| ||||||||| |||| | |||||||||||| ||| Sbjct 282863 GAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCTGGA 282922 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||| || | | |||| ||| |||| || || Sbjct 282923 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTATCGGAAGACTCA 282982 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || ||||| | || || || || || ||||| Sbjct 282983 ACTTCCAAGGTAATGGTCTTACCGGTTAATGTCTTAACGAAGATTTGCAT 283032 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/230 (67%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||||||||| || | || ||||| ||||| |||||||| || Sbjct 282347 ATACCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 282406 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | | ||||| | ||| ||||| ||| | || | | ||||| || ||| Sbjct 282407 GAAAGAGTTCTACCGTCTTCYAATTGCTTACCRGCGAARATYAAWCKYTGTTGRTCTGGA 282466 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||| || | | |||| || || | || || Sbjct 282467 GGAATACCTTCCTTGTCTTGGATCTTGGACTTRACGTTGTCAATRGTRTCRGAAGAYTCA 282526 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || | || || || || || ||||| Sbjct 282527 ACYTCMARRGTAATGGTCTTACCRGTYAAWGTCTTRACGAAGATTTGCAT 282576 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||||||||| || | || ||||| ||||| |||||||| || Sbjct 282575 ATACCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 282634 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | | ||||| | ||| ||||| ||| | || | | |||||||| ||| Sbjct 282635 GAAAGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGA 282694 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||| || | | |||| |||||| | || ||| Sbjct 282695 GGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATGGTGTCAGACGACTCG 282754 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || |||| ||| || || || || ||||| Sbjct 282755 ACTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134302712628