Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 >seq1 Length=3149860 Score = 93.3 bits (102), Expect = 4e-14 Identities = 265/405 (65%), Gaps = 12/405 (3%) Strand=Plus/Plus Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 || || || || || || | |||||| || || | |||||| ||||| | || Sbjct 1358652 ACGTAGAACTGGCAGAAGACGTGACATGGTGGCAAAGCCATCTTGCCAAAGTCTGGTGGA 1358711 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || |||| || |||||||| |||| ||||| | |||| | | | ||| Sbjct 1358712 TTCCAAGCGGACATGATAATTCTTCTGTCGTATGGATTCGTCTTTA---ACTTCTTGATG 1358768 Query 20477 ---TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCC 20533 | ||| |||||||| || || || || ||||| | || ||| ||| | Sbjct 1358769 ACATCTTGCAACTGGTCAAATCCTTGACCGGTGTAGTCTGTGTCACAATCCTTGTATTCA 1358828 Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGC 20593 || || || || ||||| ||||| |||||||| ||||||||||| || || || | || Sbjct 1358829 GCTCCGAAATGTCTCCATTGGAATCCGTAAACTGGTCCCAAATCACCTTCTCTACGGTCA 1358888 Query 20594 GCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCT 20653 | || || | | ||| |||||| | || || ||| ||||| ||||| || ||| Sbjct 1358889 GTCAAACCCAACTTGTCCAAGAACTCACGAGATCCGTTTCCTTCCCAGATCTTTACGCCT 1358948 Query 20654 GTT---CTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGC 20710 || || | | || ||| || || || || | ||||| | || || ||| Sbjct 1358949 TTTTCGCTCAACAACT---TGGCATCTGTGCTTCCAGCAACGAACCACAAGAGTTCGTGC 1359005 Query 20711 ACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAG 20755 | | ||||| |||||||| ||||||||| | ||| || ||| Sbjct 1359006 ATAATTCCTCGGGAAAACACCTTCTTTGTGGTCAATAAAGGGAAG 1359050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372695173960