Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 4e-14
>seq1
Length=3149860
Score = 93.3 bits (102), Expect = 4e-14
Identities = 265/405 (65%), Gaps = 12/405 (3%)
Strand=Plus/Plus
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416
|| || || || || || | |||||| || || | |||||| ||||| | ||
Sbjct 1358652 ACGTAGAACTGGCAGAAGACGTGACATGGTGGCAAAGCCATCTTGCCAAAGTCTGGTGGA 1358711
Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476
||||| || |||| || |||||||| |||| ||||| | |||| | | | |||
Sbjct 1358712 TTCCAAGCGGACATGATAATTCTTCTGTCGTATGGATTCGTCTTTA---ACTTCTTGATG 1358768
Query 20477 ---TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCC 20533
| ||| |||||||| || || || || ||||| | || ||| ||| |
Sbjct 1358769 ACATCTTGCAACTGGTCAAATCCTTGACCGGTGTAGTCTGTGTCACAATCCTTGTATTCA 1358828
Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGC 20593
|| || || || ||||| ||||| |||||||| ||||||||||| || || || | ||
Sbjct 1358829 GCTCCGAAATGTCTCCATTGGAATCCGTAAACTGGTCCCAAATCACCTTCTCTACGGTCA 1358888
Query 20594 GCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCT 20653
| || || | | ||| |||||| | || || ||| ||||| ||||| || |||
Sbjct 1358889 GTCAAACCCAACTTGTCCAAGAACTCACGAGATCCGTTTCCTTCCCAGATCTTTACGCCT 1358948
Query 20654 GTT---CTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGC 20710
|| || | | || ||| || || || || | ||||| | || || |||
Sbjct 1358949 TTTTCGCTCAACAACT---TGGCATCTGTGCTTCCAGCAACGAACCACAAGAGTTCGTGC 1359005
Query 20711 ACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAG 20755
| | ||||| |||||||| ||||||||| | ||| || |||
Sbjct 1359006 ATAATTCCTCGGGAAAACACCTTCTTTGTGGTCAATAAAGGGAAG 1359050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372695173960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |