Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3 111 3e-19 >seq3 Length=2118207 Score = 111 bits (122), Expect = 3e-19 Identities = 178/253 (70%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | | ||| | |||||| | ||||||| | ||| | | Sbjct 1740760 ATCATCACTGAGGCTGTCAAGATCGAGCAAGAATTCTTCACCGACGCTTTGCCA-GTCTC 1740702 Query 243562 CTTATTGGC-ATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| |||| |||||| ||||| | ||| | || ||| |||||||||| |||||| | | Sbjct 1740701 CTTGTTGGGTATGAACGCTGAATTGATGTGCCAATACGTCGAATTCGTTGCCGACAGATT 1740642 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || || || | ||| | |||| | |||||| ||| ||||| || | ||| ||||| Sbjct 1740641 ATTGATTGCTTTGGGTAACAAGAAGATTTACAACGTCAACAACCCATTCGACTTCATGGA 1740582 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACG 243740 ||| || | || || |||||||||||||| ||| | |||||||| || ||| Sbjct 1740581 AAACATCTCCTTGGCTGGTAAGACTAACTTCTTCGAGAAGAGAGTCAGTGACTACCAAAA 1740522 Query 243741 CCCTGGTGTGATG 243753 ||||||| ||| Sbjct 1740521 GGCTGGTGTCATG 1740509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879731517650