Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 179 4e-40 seq6 87.8 2e-12 seq5 86.0 7e-12 >seq3 Length=2118207 Score = 179 bits (198), Expect = 4e-40 Identities = 896/1408 (64%), Gaps = 43/1408 (3%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| || | || |||||||| || || || ||||||||||| ||||| | || || Sbjct 1784277 TAGATGTTAGAAGTATATGGCTCGAAACATTCGTTGTTACCCAATATTTGAGAAGTAGAA 1784336 Query 114002 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGT 114058 || || ||||| || || | | | |||| ||| | | ||| | || || | | | Sbjct 1784337 GCGGTTGGCATTGGAGCAACTAACAAGGA-GTTTCTCAAACCGTGCTTGGCCAACTTC-- 1784393 Query 114059 TCCTTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 114116 | ||| | || |||||||| || | || ||| || | || ||||| ||||| | Sbjct 1784394 TGCTTCAATGCATCCCAGTCCCATAACTCAG--TTGGCTTTCTCTCCCACAAGTCAAATT 1784451 Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176 | | | |||||| || ||||| || ||||| | | || || || || || | | Sbjct 1784452 GTAACAAACCTTGAGATGCTGGGGAACCCTCGTAAGATTCATAAGGACCTTCTTCGGAAG 1784511 Query 114177 CCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 114233 |||| || ||| || |||| ||| |||| || || ||||| || || | | Sbjct 1784512 CCAACTCAATAGAG---GCTTCGACGGCACCGTGGTAGATGGTCTCGAAGATTTGGATGT 1784568 Query 114234 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGA 114293 ||| | | | || || | || || || | | || | || || || || | Sbjct 1784569 TCAATTCTCTAGCTTCTTGAGAGTCGAATGGTAATCTCAATGCCATGAAAGTGTCGGCCA 1784628 Query 114294 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCC 114352 |||||| ||||| | | ||||||| | || |||| | ||||| || ||| || ||| Sbjct 1784629 AACCTTGTACACCCAAGGCAATTGGTCTATTTCTCTTGTTAGATCTCTCG-GCT-TCTGG 1784686 Query 114353 A-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 114411 | | || || | || || ||||| | | | || | || ||| ||| ||| |||| Sbjct 1784687 AACTGGGTAGTAGTTTCTGTCGATGATCTTGTTCAAGTTACGGGTAACAGACTTGGTGAC 1784746 Query 114412 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA---- 114467 ||||| | ||| || | | | | || || |||| | | || || || Sbjct 1784747 GTCATGCAACTTCTCAAAGTTGTACCACAAAGACTTGTCAT---CCTTCTCAGCAAAAGA 1784803 Query 114468 -GG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 114522 || ||||| || |||| |||||| |||| || || | | |||||| | Sbjct 1784804 TGGCAAAGCGATAGAGGCCAAATTACAGACAGCAACTTCCTCTGGAGAGGAGTACTCGAC 1784863 Query 114523 AATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 114582 || || |||||| || ||| |||||| | ||||||||||| || || | ||| | Sbjct 1784864 GATCTCACAACACAAGTTAGAAGACTTAATTATACCCAAGTTCTTCTGGTTGGTCTTCTT 1784923 Query 114583 GTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 114642 |||||| ||||||||||| | |||| | || || || || || || || | || | || Sbjct 1784924 GTTACAGGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCCTCCAAGAT 1784983 Query 114643 AGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACT 114701 || | ||| | | | | | || | || ||| | ||| || || |||||| Sbjct 1784984 GGCGTACCACAACTTTTGAGCCTTG-ACGGTGCTTCTACCTCTTCCTTCTCTCTCGTAAC 1785042 Query 114702 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 114761 | ||| | |||| || || ||||| | |||| | ||||| || | | || Sbjct 1785043 GTTCGTATAACTCTTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTG 1785102 Query 114762 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821 | |||| |||| ||||| |||| || || || | ||||||||| | ||||| |||| Sbjct 1785103 GAGAGAAAAGAGTCCATTCACCATTCTGTTCCACTCTCTTCATGAACAAATCTGGAATCC 1785162 Query 114822 AGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 114881 | | ||||| ||| | ||| | | | |||||| | || ||||| | | | Sbjct 1785163 ACAAAGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGATGT 1785222 Query 114882 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 114941 | | ||||| | ||| || |||||||| || |||| ||||| || | | | ||| Sbjct 1785223 CAATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAG-CACCTG-- 1785279 Query 114942 GACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTG 114995 |||| |||| | |||| || || || || ||| || || || |||| ||||| Sbjct 1785280 GACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTG 1785339 Query 114996 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACAT 115055 |||| ||||| | || || || || || ||| || | | | | || | Sbjct 1785340 GAATAATACCGTTGGAGGTACCGTTAGTACCAGCAATGTAAGCACCAGTAGAACGGATGT 1785399 Query 115056 CATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 115115 || ||||||| ||||||||| || || | ||| || || || || | | | Sbjct 1785400 TGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGG 1785459 Query 115116 TGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTT 115175 || |||| || || || || ||||| |||| |||||| |||||| || ||||||| Sbjct 1785460 TGTCGTAAATACCATCAATAGAGTCGTCCTTCATTGCGACAAGGAAACAAGAAGACATTT 1785519 Query 115176 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGG 115235 |||| ||| |||||||||||||| | || || | ||||| |||| | || ||| | Sbjct 1785520 GTGGAGATGGGGTACCAGCGTTGAACAAAGTAGGAGAACCGTGGGTGAAGAAACGTTGAG 1785579 Query 115236 ACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGA 115295 ||||| | ||| | || | ||| ||||| || ||||||||||| || || | Sbjct 1785580 ACATCAAGTTGTAAGATTCGATGACCTTCTCGATGTCGTCACCGTGAATACCAATGGAAA 1785639 Query 115296 CCCGCATAAACATGTATTGGGGTGTTTC 115323 | | ||| | || | ||| ||| |||| Sbjct 1785640 CTCTCATGATCAAATGTTGTGGTCTTTC 1785667 >seq6 Length=1622446 Score = 87.8 bits (96), Expect = 2e-12 Identities = 267/408 (65%), Gaps = 11/408 (3%) Strand=Plus/Plus Query 10790 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 10849 ||||| ||||| || | | | ||| | || | ||||||| | ||| || | || Sbjct 103707 TCAAAACGACCAGGTCTCAATAAGGCTTTATCCAAGATATCAGCTCTGTTAGTACCTGCC 103766 Query 10850 ATGACAACGATGCCCGTCTC-GTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 10908 | ||||||| | |||| | | || || |||||||| || ||| | |||||| | Sbjct 103767 AAAACAACGACGTG-GTCTGAGGTGTCGAAACCATCCATTTCGACCAATAATTGATTCAA 103825 Query 10909 GGTTTGTTCGCGTTCATCATT-----CGCGGGCAT-ACCACCCGCACTGCGTTGCTTACC 10962 ||| ||| || ||||| || ||| ||||| ||| || || | || ||||| Sbjct 103826 GGTGGTTTCACGCTCATCGTTAGCACCGCTGGCATTACCCTTCGAAC---GCTGTTTACC 103882 Query 10963 GACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAA 11022 | ||| ||||| ||||||| ||||| || | || ||||||||||||| | || Sbjct 103883 AATGGCATCAATCTCATCGACAAAAACAATGGAAGGGGCATTTTCACGGGCAGTCTTGAA 103942 Query 11023 GATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGA 11082 | || || ||||| ||||||||||| ||||||||||| || || | || | || Sbjct 103943 CAAGTCACGCACTCTGGATGCACCGACACCAACAAACATTTCGACGAACTCGGAACCAGA 104002 Query 11083 ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 11142 | | | |||||| || | || || ||| | |||| ||| | | ||||| || Sbjct 104003 AACTGAGTAGAAGGGAACACCCGCCTCCCCAGCGGTTGCTCTGGCAATTAAAGTCTTACC 104062 Query 11143 CGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190 || || || || | | || ||||| ||||||||| | || || Sbjct 104063 AGTACCTGGAGGACCAGACAAAATCGCACCTCGTGGGATCTTTGCTCC 104110 >seq5 Length=1730773 Score = 86.0 bits (94), Expect = 7e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 114482 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 114541 ||||||||||| | ||||| ||| || ||||| | |||||| ||||||||| Sbjct 1418300 AGATTACACACCGCTGTCTCTTCCGGCGAAGAATACTCCACAATTTCGCAGCACAAATTT 1418241 Query 114542 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 114601 || ||| || |||||||| ||||||||||||| ||||| ||||||||||| Sbjct 1418240 GAGGACTTGATTACACCCAAGTTGCTTTGATTTGACTTCAAATTACAGGCATCCTTGTAT 1418181 Query 114602 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633 | ||||||||| || || || ||||| || Sbjct 1418180 AACATGTATGGACCACCTGTTTCTGTTTGTGA 1418149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353458128520