Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3 147 2e-30 >seq3 Length=2118207 Score = 147 bits (162), Expect = 2e-30 Identities = 481/739 (65%), Gaps = 10/739 (1%) Strand=Plus/Minus Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964 |||||||||| || ||||| ||||| |||||||| |||||||| | | | |||| Sbjct 1785546 TGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCAATGAAGG 1785487 Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024 |||||| || || |||| ||||| | | ||| |||||| || || || | Sbjct 1785486 ACGACTCTATTGATGGTATTTACGACACCTTGAAGACCTGTGCCTTGATTTCCAAGAGTG 1785427 Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084 | || || || || | | ||| || | ||| | | ||| | ||||| |||| Sbjct 1785426 CTGGTGGTATTGGTTTGCACATTCACAACATCCGTTCTACTGGTGCTTACATTGCTGGTA 1785367 Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144 | || || ||||||||||| | | || ||| | || |||||||||||| | || | | Sbjct 1785366 CTAACGGTACCTCCAACGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTGCTAGAT 1785307 Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204 |||| ||||| |||||| | | | ||| |||| || | || | ||||| |||| Sbjct 1785306 ACGTTGACCAAGGTGGTAACAAGCGTCCAGGTGCTTTTGCCTTGTACTTGGAGCCATGGC 1785247 Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264 |||| ||| | | ||||| ||| | ||||||| ||||| || || || | Sbjct 1785246 ACGCAGACATCTTCGACTTCATTGACATCAGAAAGAATCACGGTAAGGAAGAAATCAGAG 1785187 Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324 | ||||| | ||| ||| | ||| | ||||| | || ||||| | || || | | Sbjct 1785186 CTAGAGATTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGAGTGGAACAGA 1785127 Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGAT 94384 | | |||| |||||| | ||| || ||| ||| || || | || |||| || | Sbjct 1785126 ATGGTGAATGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTTTACGG-T 1785068 Query 94385 CGCG-TTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGG--CCAGGAAGGTT 94440 || || ||||| || || | |||||||| | | ||| ||| || | || Sbjct 1785067 GACGAATTCGAAGAGTTATACGAACGTTACGAGAGAGAAGGAAGAGGTAGAAGCACCGTC 1785008 Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500 | | ||| ||| ||||| | ||| |||| | ||| || || ||||| || Sbjct 1785007 A---AGGCTCAAAAGTTGTGGTACGCCATCTTGGAGGCTCAGACTGAAACCGGTACTCCT 1784951 Query 94501 TACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGAT 94559 | ||| |||| |||||| |||| ||| ||| |||||||| || || | || | || Sbjct 1784950 TTCATGTTGTACAAGGATGCCTGT-AACAAGAAGACCAACCAGAAGAACTTGGGTATAAT 1784892 Query 94560 CAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGT 94619 ||| || || |||| ||||| |||||||| | ||||| || || ||||||| Sbjct 1784891 TAAGTCTTCTAACTTGTGTTGTGAGATCGTCGAGTACTCCTCTCCAGAGGAAGTTGCTGT 1784832 Query 94620 GTGTAACCTGGGCTCCATC 94638 ||||| ||| ||| ||| Sbjct 1784831 CTGTAATTTGGCCTCTATC 1784813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723082503240