Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq3 147 2e-30
>seq3
Length=2118207
Score = 147 bits (162), Expect = 2e-30
Identities = 481/739 (65%), Gaps = 10/739 (1%)
Strand=Plus/Minus
Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964
|||||||||| || ||||| ||||| |||||||| |||||||| | | | ||||
Sbjct 1785546 TGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCAATGAAGG 1785487
Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024
|||||| || || |||| ||||| | | ||| |||||| || || || |
Sbjct 1785486 ACGACTCTATTGATGGTATTTACGACACCTTGAAGACCTGTGCCTTGATTTCCAAGAGTG 1785427
Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084
| || || || || | | ||| || | ||| | | ||| | ||||| ||||
Sbjct 1785426 CTGGTGGTATTGGTTTGCACATTCACAACATCCGTTCTACTGGTGCTTACATTGCTGGTA 1785367
Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144
| || || ||||||||||| | | || ||| | || |||||||||||| | || | |
Sbjct 1785366 CTAACGGTACCTCCAACGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTGCTAGAT 1785307
Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204
|||| ||||| |||||| | | | ||| |||| || | || | ||||| ||||
Sbjct 1785306 ACGTTGACCAAGGTGGTAACAAGCGTCCAGGTGCTTTTGCCTTGTACTTGGAGCCATGGC 1785247
Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264
|||| ||| | | ||||| ||| | ||||||| ||||| || || || |
Sbjct 1785246 ACGCAGACATCTTCGACTTCATTGACATCAGAAAGAATCACGGTAAGGAAGAAATCAGAG 1785187
Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324
| ||||| | ||| ||| | ||| | ||||| | || ||||| | || || | |
Sbjct 1785186 CTAGAGATTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGAGTGGAACAGA 1785127
Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGAT 94384
| | |||| |||||| | ||| || ||| ||| || || | || |||| || |
Sbjct 1785126 ATGGTGAATGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTTTACGG-T 1785068
Query 94385 CGCG-TTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGG--CCAGGAAGGTT 94440
|| || ||||| || || | |||||||| | | ||| ||| || | ||
Sbjct 1785067 GACGAATTCGAAGAGTTATACGAACGTTACGAGAGAGAAGGAAGAGGTAGAAGCACCGTC 1785008
Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500
| | ||| ||| ||||| | ||| |||| | ||| || || ||||| ||
Sbjct 1785007 A---AGGCTCAAAAGTTGTGGTACGCCATCTTGGAGGCTCAGACTGAAACCGGTACTCCT 1784951
Query 94501 TACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGAT 94559
| ||| |||| |||||| |||| ||| ||| |||||||| || || | || | ||
Sbjct 1784950 TTCATGTTGTACAAGGATGCCTGT-AACAAGAAGACCAACCAGAAGAACTTGGGTATAAT 1784892
Query 94560 CAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGT 94619
||| || || |||| ||||| |||||||| | ||||| || || |||||||
Sbjct 1784891 TAAGTCTTCTAACTTGTGTTGTGAGATCGTCGAGTACTCCTCTCCAGAGGAAGTTGCTGT 1784832
Query 94620 GTGTAACCTGGGCTCCATC 94638
||||| ||| ||| |||
Sbjct 1784831 CTGTAATTTGGCCTCTATC 1784813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723082503240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |