Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 174 2e-38 seq6 93.3 5e-14 >seq3 Length=2118207 Score = 174 bits (192), Expect = 2e-38 Identities = 897/1409 (64%), Gaps = 45/1409 (3%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | || |||||||| || || || ||||||||||| ||||| | || || Sbjct 1784277 TAGATGTTAGAAGTATATGGCTCGAAACATTCGTTGTTACCCAATATTTGAGAAGTAGAA 1784336 Query 115963 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTGCGGAGACCCACCCC--CCTAATGCGT 116019 || || ||||| || || | | | |||| ||| | | ||| | || | | | Sbjct 1784337 GCGGTTGGCATTGGAGCAACTAACAAGGA-GTTTCTCAAACCGTGCTTGGCCAACTTC-- 1784393 Query 116020 TCCTTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACT 116077 | ||| | || |||||||| || | || ||| || | |||||||| ||||| | Sbjct 1784394 TGCTTCAATGCATCCCAGTCCCATAACTCAG--TTGGCTTTCTCTCCCACAAGTCAAATT 1784451 Query 116078 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 116137 | | | |||||| || ||||| || ||||| | | ||||| || || || | | Sbjct 1784452 GTAACAAACCTTGAGATGCTGGGGAACCCTCGTAAGATTCATAAGGACCTTCTTCGGAAG 1784511 Query 116138 CCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 116194 |||| || ||| || |||| ||| |||| || || ||||| || || | | Sbjct 1784512 CCAACTCAATAGAG---GCTTCGACGGCACCGTGGTAGATGGTCTCGAAGATTTGGATGT 1784568 Query 116195 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGA 116254 ||| | | | || || | || || || | | | | || || || || | Sbjct 1784569 TCAATTCTCTAGCTTCTTGAGAGTCGAATGGTAATCTCAATGCCATGAAAGTGTCGGCCA 1784628 Query 116255 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCC 116313 |||||| ||||| | | ||||||| | || |||| | ||||| || ||| || ||| Sbjct 1784629 AACCTTGTACACCCAAGGCAATTGGTCTATTTCTCTTGTTAGATCTCTCG-GCT-TCTGG 1784686 Query 116314 A-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 116372 | | || || | || || ||||| | | | || | || ||| ||| ||| |||| Sbjct 1784687 AACTGGGTAGTAGTTTCTGTCGATGATCTTGTTCAAGTTACGGGTAACAGACTTGGTGAC 1784746 Query 116373 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA---- 116428 ||||| | ||| || | | | | || || |||| | | || || || Sbjct 1784747 GTCATGCAACTTCTCAAAGTTGTACCACAAAGACTTGTCAT---CCTTCTCAGCAAAAGA 1784803 Query 116429 -GG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 116483 || ||||| || |||| |||||| |||| || || | | |||||| | Sbjct 1784804 TGGCAAAGCGATAGAGGCCAAATTACAGACAGCAACTTCCTCTGGAGAGGAGTACTCGAC 1784863 Query 116484 AATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 116543 || || |||||| || ||| |||||| | ||||||||||| || || | ||| | Sbjct 1784864 GATCTCACAACACAAGTTAGAAGACTTAATTATACCCAAGTTCTTCTGGTTGGTCTTCTT 1784923 Query 116544 GTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 116603 |||||| ||||||||||| | ||| | || || || || || || || | || | || Sbjct 1784924 GTTACAGGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCCTCCAAGAT 1784983 Query 116604 AGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACT 116662 || | ||| | | | | | || | || ||| | ||| || || |||||| Sbjct 1784984 GGCGTACCACAACTTTTGAGCCTTG-ACGGTGCTTCTACCTCTTCCTTCTCTCTCGTAAC 1785042 Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTG 116722 | ||| | | || || || ||||| | | |||| | ||||| || | | || Sbjct 1785043 GTTCGTATAACTCTTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTG 1785102 Query 116723 GACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 116782 || |||| |||| ||||| |||| || || || | ||||||||| | ||||| |||| Sbjct 1785103 GAGAGAAAAGAGTCCATTCACCATTCTGTTCCACTCTCTTCATGAACAAATCTGGAATCC 1785162 Query 116783 AGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 116842 | | || | ||| | ||| | | | |||||| | || ||||| | | | Sbjct 1785163 ACAAAGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGATGT 1785222 Query 116843 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGC 116902 | | ||||| | ||| || |||||||| || |||| ||||| || | | || || Sbjct 1785223 CAATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACC--TG- 1785279 Query 116903 GACG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTG 116956 |||| |||| | |||| || || || || || ||| || || |||| ||||| Sbjct 1785280 GACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTG 1785339 Query 116957 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACA 117015 |||| ||||| | || || || || || ||| || || || | | || Sbjct 1785340 GAATAATACCGTTGGAGGTACCGTTAGTACCAGCAATGTAAGCACCAGTAGAA-CGGATG 1785398 Query 117016 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGA 117075 | ||| ||||||| ||||||||| || || | ||| || || || || | | | Sbjct 1785399 TTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAG 1785458 Query 117076 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 117135 || |||| || ||||| || ||||| |||| |||||| ||||| || |||||| Sbjct 1785459 GTGTCGTAAATACCATCAATAGAGTCGTCCTTCATTGCGACAAGGAAACAAGAAGACATT 1785518 Query 117136 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGG 117195 ||||| ||| |||||||||||||| | || || | ||||| |||| | || ||| Sbjct 1785519 TGTGGAGATGGGGTACCAGCGTTGAACAAAGTAGGAGAACCGTGGGTGAAGAAACGTTGA 1785578 Query 117196 GACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAG 117255 |||||| | ||| | || | ||| ||||| || ||||||||||| || || Sbjct 1785579 GACATCAAGTTGTAAGATTCGATGACCTTCTCGATGTCGTCACCGTGAATACCAATGGAA 1785638 Query 117256 ACCCGCATAAACATGTATTGGGGTGTTTC 117284 || | ||| | || | ||| ||| |||| Sbjct 1785639 ACTCTCATGATCAAATGTTGTGGTCTTTC 1785667 >seq6 Length=1622446 Score = 93.3 bits (102), Expect = 5e-14 Identities = 268/408 (66%), Gaps = 11/408 (3%) Strand=Plus/Plus Query 12705 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 12764 ||||| ||||| || | | | ||| | || | ||||||| | ||| || | || Sbjct 103707 TCAAAACGACCAGGTCTCAATAAGGCTTTATCCAAGATATCAGCTCTGTTAGTACCTGCC 103766 Query 12765 ATGACAACGATGCCCGTCTC-GTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 12823 | ||||||| | |||| | | ||||| |||||||| || ||| | |||||| | Sbjct 103767 AAAACAACGACGTG-GTCTGAGGTGTCGAAACCATCCATTTCGACCAATAATTGATTCAA 103825 Query 12824 GGTTTGTTCACGTTCATCATT-----CGCGGGCAT-ACCACCCGCACTGCGTTGCTTACC 12877 ||| |||||| ||||| || ||| ||||| ||| || || | || ||||| Sbjct 103826 GGTGGTTTCACGCTCATCGTTAGCACCGCTGGCATTACCCTTCGAAC---GCTGTTTACC 103882 Query 12878 GACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAA 12937 | ||| ||||| || || | ||||| || | || ||||||||||||| | || Sbjct 103883 AATGGCATCAATCTCATCGACAAAAACAATGGAAGGGGCATTTTCACGGGCAGTCTTGAA 103942 Query 12938 GATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGA 12997 | || |||||||| ||||||||||| |||||||| || || || | || | || Sbjct 103943 CAAGTCACGCACTCTGGATGCACCGACACCAACAAACATTTCGACGAACTCGGAACCAGA 104002 Query 12998 ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 13057 | | | |||||| || | || || ||| | |||| ||| | | ||||| || Sbjct 104003 AACTGAGTAGAAGGGAACACCCGCCTCCCCAGCGGTTGCTCTGGCAATTAAAGTCTTACC 104062 Query 13058 CGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 || ||||| || | | || ||||| ||||||||| | || || Sbjct 104063 AGTACCTGGAGGACCAGACAAAATCGCACCTCGTGGGATCTTTGCTCC 104110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507054292040