Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 9e-19
>seq3
Length=2118207
Score = 109 bits (120), Expect = 9e-19
Identities = 320/493 (65%), Gaps = 0/493 (0%)
Strand=Plus/Plus
Query 203837 GTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896
|||||||| || |||||||| ||||| | |||| | |||| | ||||||||
Sbjct 1783887 GTCTTGTCGACAGTGAACTGGATGGCAGCAGCAGCAGCTTGGGTTCTTAAGTAGTACATA 1783946
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| ||||| | ||||||| ||| ||||| | ||||| || | || || | || |
Sbjct 1783947 CCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTACCCATTGTT 1784006
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
||||| ||||||||||||| ||||| ||| || ||||| | || | || ||
Sbjct 1784007 GGGTCCTTGATGTGAATGTTCAACGACTGTGATTGATCAATGAAGGCAGCTCTGTCAGCA 1784066
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||||| || || ||| || || || ||||| || |||||| | | | | ||
Sbjct 1784067 GCCATATCAATGATATGCTTTTGTGAGATTTCCCAAACAGTCTTGTATAAGGCCTTGAGC 1784126
Query 204077 TGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136
| | || | | || | ||| ||| || ||||||| | || | | || ||
Sbjct 1784127 TCATCTGGAATGTTAGCCAATGTCTGGATAGAACCGTTGTTAGAAATGATGTTGTTCTTC 1784186
Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196
| | || ||| || ||||| || || || |||| || || ||||||| |||
Sbjct 1784187 ATGGCATCGTTCCAGATACCCAAATCGACCAAATCACGCAACAAGTATGGGTTGACGATT 1784246
Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256
|| || ||||| | | ||| | || | | | | ||| || |||| |||||
Sbjct 1784247 TGGAATTCTCCTGCTAACACTCTTCTAGAGTAGATGTTAGAAGTATATGGCTCGAAACAT 1784306
Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316
|||||||| || || || |||| || || || ||||| ||||| | | || ||||
Sbjct 1784307 TCGTTGTTACCCAATATTTGAGAAGTAGAAGCGGTTGGCATTGGAGCAACTAACAAGGAG 1784366
Query 204317 TTGCGCACACCGT 204329
|| | || |||||
Sbjct 1784367 TTTCTCAAACCGT 1784379
Score = 84.2 bits (92), Expect = 3e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 159957 AGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAA 160016
|||| ||||| ||||| | | | || ||||| | || | | || | ||| || |
Sbjct 1740847 AGATCAACTCATTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTTAACCAGAAGA 1740906
Query 160017 TGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCT 160076
| | ||||||| ||| || || || || ||||| ||||| ||||| || || | || |
Sbjct 1740907 TAGAAGCAAAAGAACCACTGAAGAAAATACCCTCAACGGCAGCAAAAGCAACTAATCTTT 1740966
Query 160077 CACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGA 160136
|||| || |||| | | |||| | |||| || |||||| |||||||||||| ||
Sbjct 1740967 CACCGAACAAGGCCTCGTCGTCAGAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGA 1741026
Query 160137 TGCACGGCATG 160147
|||| || |||
Sbjct 1741027 TGCATGGAATG 1741037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155011150640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |