Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 109 9e-19 >seq3 Length=2118207 Score = 109 bits (120), Expect = 9e-19 Identities = 320/493 (65%), Gaps = 0/493 (0%) Strand=Plus/Plus Query 203837 GTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896 |||||||| || |||||||| ||||| | |||| | |||| | |||||||| Sbjct 1783887 GTCTTGTCGACAGTGAACTGGATGGCAGCAGCAGCAGCTTGGGTTCTTAAGTAGTACATA 1783946 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 || ||||| | ||||||| ||| ||||| | ||||| || | || || | || | Sbjct 1783947 CCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTACCCATTGTT 1784006 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 ||||| ||||||||||||| ||||| ||| || ||||| | || | || || Sbjct 1784007 GGGTCCTTGATGTGAATGTTCAACGACTGTGATTGATCAATGAAGGCAGCTCTGTCAGCA 1784066 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||||| || || ||| || || || ||||| || |||||| | | | | || Sbjct 1784067 GCCATATCAATGATATGCTTTTGTGAGATTTCCCAAACAGTCTTGTATAAGGCCTTGAGC 1784126 Query 204077 TGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136 | | || | | || | ||| ||| || ||||||| | || | | || || Sbjct 1784127 TCATCTGGAATGTTAGCCAATGTCTGGATAGAACCGTTGTTAGAAATGATGTTGTTCTTC 1784186 Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196 | | || ||| || ||||| || || || |||| || || ||||||| ||| Sbjct 1784187 ATGGCATCGTTCCAGATACCCAAATCGACCAAATCACGCAACAAGTATGGGTTGACGATT 1784246 Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256 || || ||||| | | ||| | || | | | | ||| || |||| ||||| Sbjct 1784247 TGGAATTCTCCTGCTAACACTCTTCTAGAGTAGATGTTAGAAGTATATGGCTCGAAACAT 1784306 Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316 |||||||| || || || |||| || || || ||||| ||||| | | || |||| Sbjct 1784307 TCGTTGTTACCCAATATTTGAGAAGTAGAAGCGGTTGGCATTGGAGCAACTAACAAGGAG 1784366 Query 204317 TTGCGCACACCGT 204329 || | || ||||| Sbjct 1784367 TTTCTCAAACCGT 1784379 Score = 84.2 bits (92), Expect = 3e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 159957 AGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAA 160016 |||| ||||| ||||| | | | || ||||| | || | | || | ||| || | Sbjct 1740847 AGATCAACTCATTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTTAACCAGAAGA 1740906 Query 160017 TGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCT 160076 | | ||||||| ||| || || || || ||||| ||||| ||||| || || | || | Sbjct 1740907 TAGAAGCAAAAGAACCACTGAAGAAAATACCCTCAACGGCAGCAAAAGCAACTAATCTTT 1740966 Query 160077 CACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGA 160136 |||| || |||| | | |||| | |||| || |||||| |||||||||||| || Sbjct 1740967 CACCGAACAAGGCCTCGTCGTCAGAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGA 1741026 Query 160137 TGCACGGCATG 160147 |||| || ||| Sbjct 1741027 TGCATGGAATG 1741037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155011150640