Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq9 165 3e-35 seq2 158 5e-33 seq5 120 1e-21 seq8 113 2e-19 seq6 105 3e-17 >seq9 Length=507287 Score = 165 bits (182), Expect = 3e-35 Identities = 181/240 (75%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || |||||||||| || ||||||||||| |||||||| ||| Sbjct 282120 ATGCAAATCTTCGTTAAGACTTTGACTGGTAAGACCATTACTCTTGAGGTTGAATCTTCT 282061 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| |||| || || ||||| |||||||| |||||||| || ||| Sbjct 282060 GACACCATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 282001 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || |||||| | || || ||| | ||||| || |||||| | | || || || Sbjct 282000 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAAC 281941 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAG--GATAAATACATTTTT 391287 || | ||||| | || ||||||||||| |||||| |||||| | | |||| |||||| Sbjct 281940 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTAAGATTGAGAGGTGGTCAATAAATTTTT 281881 Score = 154 bits (170), Expect = 6e-32 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||||| || ||||||||||| |||||||| ||| Sbjct 282348 ATGCAAATCTTCGTYAAGACTTTGACTGGTAAGACCATTACTCTTGARGTTGAATCTTCT 282289 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| |||| || || ||||| |||||||| |||||||| || ||| Sbjct 282288 GACACYATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGAYCAA 282229 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || |||||| | || || ||| | ||||| || |||||| | | || || || Sbjct 282228 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAAC 282169 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || ||||||||||| || ||| ||||||| Sbjct 282168 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTRAGATTGAGAGG 282125 Score = 147 bits (162), Expect = 9e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || |||||||||| ||||| |||||||| || || || ||| Sbjct 282804 ATGCAAATCTTCGTTAAGACTTTGACTGGTAAGACTATCACTCTTGAAGTCGAGTCGTCT 282745 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| |||| || || ||||| |||||||| |||||||| || ||| Sbjct 282744 GACACCATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 282685 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || |||||| | || || ||| | ||||| || |||||| | | || || || Sbjct 282684 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAAC 282625 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || ||||||||||| || ||| ||||||| Sbjct 282624 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTGAGATTGAGAGG 282581 Score = 134 bits (148), Expect = 5e-26 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || | || ||||| || ||||| | || ||||| || || Sbjct 282576 ATGCAAATCTTCGTYAAGACWTTRACYGGTAAGACCATTACYYTKGARGTTGARTCTTCY 282517 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | || || || ||||| |||||||| |||||||| || ||| Sbjct 282516 GAYACYATTGACAACGTYAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGAYCAA 282457 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || || ||| | ||||| || |||||| | | || || || Sbjct 282456 CARMGWTTRATYTTCGCYGGTAAGCAATTRGAAGACGGTAGAACTCTTTCTGACTACAAC 282397 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || ||||||||||| || ||| ||||||| Sbjct 282396 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTGAGATTGAGAGG 282353 >seq2 Length=2610183 Score = 158 bits (174), Expect = 5e-33 Identities = 283/406 (70%), Gaps = 13/406 (3%) Strand=Plus/Minus Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 ||||||||| |||| ||| |||||| | ||||||||||||||||| ||| ||||| Sbjct 1895450 ATTCAAGTATATTACAAAAATGAAACGAGGTACTTTGCTCCTGAAGAAATATCAGCTATG 1895391 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || | | ||||||||| | ||||| |||| ||||| | | || |||||| Sbjct 1895390 ATTTTATCCAAAATGAAATCCTCGGCAGAGGTATATGTTGGTACAAGCATCACAGATGCA 1895331 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | |||||||| || || ||||||||||| ||| |||||||||| || |||| ||| Sbjct 1895330 GTTGTCACTGTTCCAGCATACTTCAATGATGCTCAAAGGCAAGCAACAAAGAATGCCGGA 1895271 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAA--TTATTAATGAACCTACAGCAGCTGCTCTAG 451442 ||| || ||||||||||| || ||| | | |||||||| || |||||||| || | Sbjct 1895270 TCTATAGCAGGTTTAAATGT--TTTGAAGGTCCTAAATGAACCAACGGCAGCTGCACTTG 1895213 Query 451443 CATATGGACTAGGAAAATCAAAAGA-AACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 | ||||| || ||| || ||| | | || ||| | || | || | || || Sbjct 1895212 CCTATGGGCT----CAATAAAGAGATCAAGGGCGAGAAATACGTTCTTGTTTACGACTTG 1895157 Query 451502 GGTGGAGGAACTCATGATACTTCTGTACTTT-CAATTGAAGATGGGGT-ATTTGAAGTAA 451559 ||||| ||||| ||| ||| | ||| || | || |||| | ||||||||| | Sbjct 1895156 GGTGGTGGAACCTTCGAT--GTCTCCATTTTGAAAATTAAACTGGGTTCATTTGAAGTGA 1895099 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | | ||| ||||||| | | ||||| || ||| ||||||| Sbjct 1895098 AATCGACCTCTGGTGATGGGTACTTGGGAGGGGAGGATTTTGATAA 1895053 Score = 156 bits (172), Expect = 2e-32 Identities = 285/408 (70%), Gaps = 17/408 (4%) Strand=Plus/Plus Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 ||||||||| |||| ||| |||||| | ||||||||||||||||| ||| ||||| Sbjct 2045616 ATTCAAGTATATTACAAAAATGAAACCAGGTACTTTGCTCCTGAAGAAATATCAGCTATG 2045675 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || | | ||||||||| | ||||| |||||| ||| | | || |||||| Sbjct 2045676 ATTTTATCCAAAATGAAATCTTCGGCAGAGGTATATATAGGTACAAGCATCACAGATGCA 2045735 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | |||||||| || || ||||||||||| ||| |||||||||| | ||||| ||| Sbjct 2045736 GTTGTCACTGTTCCAGCATACTTCAATGATGCTCAAAGGCAAGCAACAATGGATGCCGGA 2045795 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAA--TTATTAATGAACCTACAGCAGCTGCTCTAG 451442 ||| || ||||| ||||| || ||| | | |||||||| || |||||||| || | Sbjct 2045796 ACTATAGCAGGTTTGAATGT--TTTGAAGGTCCTAAATGAACCAACGGCAGCTGCACTTG 2045853 Query 451443 CATATGGACTAGGAAAATCAAAAGA-AACA--GAAGaaaaaaaTATTTTAGTATTTGATT 451499 | ||||| || ||| ||||| | || | || ||| | || | || | || | Sbjct 2045854 CCTATGGCCT----CAAT--AAAGATATCAAGGGCGAGAAATACGTTCTTGTTTACGACT 2045907 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTT-CAATTGAAGATGGGGT-ATTTGAAGT 451557 | ||||| |||||| ||| ||| | ||| || | || |||| | ||||||||| Sbjct 2045908 TGGGTGGTGGAACTTTCGAT--GTCTCCATTTTGAAAATTAAACTGGGTTCATTTGAAGT 2045965 Query 451558 AAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || | ||| ||| ||| | | |||||||| ||| ||||||| Sbjct 2045966 GAAATCGACCTCTGGCGATGTGTACTTGGGAGGTGAGGATTTTGATAA 2046013 >seq5 Length=1730773 Score = 120 bits (132), Expect = 1e-21 Identities = 276/414 (67%), Gaps = 5/414 (1%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| | || ||||| | || || ||||| || || || |||| |||||| Sbjct 1019124 GGAAAGCCAAACATCCAAGTTGAGTACAAGGGTGAGACCAAGGTCTTCACTCCAGAAGAA 1019183 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||| ||||| | || ||||| || || || || | | ||| | Sbjct 1019184 ATCTCCTCCATGATTCTTTCCAAGATGAAGGAGACTGCTGAGGGTTTCCTCGGTACCAAG 1019243 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | ||||| || | || || || ||||| ||||| ||| | ||| | ||||| || Sbjct 1019244 GTCAACGATGCGGTTGTCACCGTCCCAGCTTACTTCAACGATTCCCAAAGACAAGCTACC 1019303 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | |||||||||||||| ||| | |||| ||||| || || || || Sbjct 1019304 AAGGATGCTGGTCTCATTGCTGGTTTAAACGTTATGAGAATCATTAACGAGCCAACTGCC 1019363 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA-GAAGaaaaaaaTATTTTAGT 451491 ||||| | || || || || | | | |||| | ||||| || || || | | Sbjct 1019364 GCTGCCATTGCCTACGGTCTTG----ACAAGAAGACCGAGGAAGAGAAGAACGTTCTTAT 1019419 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551 || || || |||||||| ||| ||| || | | || || ||||| || | || Sbjct 1019420 CTTCGACTTGGGTGGAGGTACTTTCGATGTCTCCTTGTTGTCTATCGAAGACGGTATCTT 1019479 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| || ||||| ||||| | || ||||||||| | || || Sbjct 1019480 CGAGGTCAAGGCCACTGCCGGTGACACTCACTTGGGTGGTGAAGATTTCGACAA 1019533 Score = 86.0 bits (94), Expect = 2e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 502389 GCACTAATGCCAACAGCATCTACATCTCAACTATTAGGCAATTATGAATCATTTGAACCA 502448 |||| |||||||| || ||||| |||||| | | ||| | | |||| |||||||| Sbjct 1418788 GCACCTATGCCAACGGCCTCTACTTCTCAAATTCTTGGCTTTAACGAATGCTTTGAACCT 1418847 Query 502449 TTTACTTCTAATATATATACTAGAAGAACTTTAGCAGGTGAATTTATAGTTGTTAATAAA 502508 | |||||||||| | || ||||||||| | | | || || || | || || || Sbjct 1418848 TATACTTCTAATTTGTACACTAGAAGAGTTCTTTCTGGAGAGTTCCAGATAGTGAACAAG 1418907 Query 502509 CATTTAATAAATGATTTGAATGAAATCGGTGAATGGACTAATGAAATTAGACAAAAAGTA 502568 || | | || || |||| ||| | ||| |||||| || ||| || | || | Sbjct 1418908 TATCTTTTGAAGGACTTGATTGATTTAGGTTTATGGACATCTGCAATGAGGAATAAGATT 1418967 Query 502569 ATTAATGATAATGGTTCTATTCAAAATATATT 502600 ||| ||| || ||||||||||| |||||||| Sbjct 1418968 ATTCTTGAAAACGGTTCTATTCAGAATATATT 1418999 >seq8 Length=1128438 Score = 113 bits (124), Expect = 2e-19 Identities = 272/409 (67%), Gaps = 7/409 (2%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 ||||| ||| | ||| | || | | || || || || || || || |||| |||||| Sbjct 474138 GGAAAACCCAACATTGAGGTTGAGTTCAAGGGCGAGACCAAGACCTTCACTCCAGAAGAA 474197 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||| || | || ||||| ||||| || ||| || |||| || || Sbjct 474198 ATCTCGTCCATGATTTTGGTCAAGATGAAGGAAACCGCTGAAAGTTACCTTGGATCCACA 474257 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 | ||||| || || |||||||||| ||||| ||||| ||| | || | || || || Sbjct 474258 ATCACTGACGCTGTCGTTACTGTTCCTGCTTACTTCAACGATTCCCAGAGACAGGCCACC 474317 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 ||||| || || | ||||||||||| || || | |||| || || ||||| || || Sbjct 474318 AAAGACGCCGGTCTCATTGCTGGTTTGAACGTGTTGAGAATCATCAACGAACCAACTGCC 474377 Query 451433 GCTGCTCTAGCATA-----TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTT 451487 |||||| | || || ||||| | |||| | |||| || | ||| | ||| | | Sbjct 474378 GCTGCTATCGCCTACGGTTTGGAC-AAGAAAGGCCAAAG-CACTCACGAACAGAATGTGT 474435 Query 451488 TAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGG 451547 | | || || || || || || ||| ||| || || | | ||||| || || Sbjct 474436 TGATCTTCGACTTGGGAGGTGGTACTTTCGATGTGTCGTTATTGGCCATTGACGAAGGTA 474495 Query 451548 TATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 | || || || || || || |||||| || || | ||||| || || Sbjct 474496 TTTTCGAGGTCAAAGCTACTGCTGGTGACACCCACTTGGGAGGCGAGGA 474544 >seq6 Length=1622446 Score = 105 bits (116), Expect = 3e-17 Identities = 247/368 (67%), Gaps = 10/368 (3%) Strand=Plus/Minus Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTAC-TAAAATGAAAGAAACAGC 451290 || ||||| |||| |||||||| || |||| | |||| ||| ||||| | | || Sbjct 298824 AAGACTTTCTCTCCAGAAGAAATATCCGGTATGAT-CTTAGGTAAGATGAAGAACATTGC 298766 Query 451291 AGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAA 451350 ||| |||| | || ||||| | || || | |||||||| ||||| ||||| Sbjct 298765 CGAAGAATACTTGGGCAAGAAGGTTACCCACGCCGTTGTCACTGTTCCAGCTTACTTCAA 298706 Query 451351 TGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCG 451410 ||||| ||| | ||||| || ||||| || || ||||||||||| |||||| | | Sbjct 298705 CGATGCCCAAAGACAAGCCACCAAAGACGCCGGTACCATTGCTGGTTTGAATGTTTTGAG 298646 Query 451411 AATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAAC 451470 |||| |||| || || || || ||||| | || || ||| ||| ||| | || Sbjct 298645 AATTGTTAACGAGCCAACCGCCGCTGCCATTGCCTACGGATTAG-----ACAAGACTGAC 298591 Query 451471 AG-AAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTAC 451529 | ||||| |||| || || | || || ||||||||||| ||| ||| | Sbjct 298590 GGCGAGAAACAAATCATT--GTTTACGACTTGGGTGGAGGAACCTTCGATGTTTCCTTGT 298533 Query 451530 TTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAG 451589 | || ||||||| || || || ||||| || || ||||| ||||| | || | Sbjct 298532 TATCCATTGAAGGAGGTGTTTTCGAAGTCTTAGCTACTGCCGGTGACACTCACTTGGGTG 298473 Query 451590 GTGAAGAT 451597 |||||||| Sbjct 298472 GTGAAGAT 298465 Score = 86.0 bits (94), Expect = 2e-11 Identities = 186/278 (67%), Gaps = 8/278 (3%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || | || || || || ||||||||||| || || || | ||||||||| || Sbjct 1402655 ATGCCGTTGTGACGGTCCCAGCATATTTCAATGACGCCCAGCGCCTGGCAACTAAAAATT 1402596 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | ||| | | | ||||| | || || || | |||| ||||| || |||||||| Sbjct 1402595 CTGGAAAGTTGGTAGGTTTGGACGTACTCAGAGTAGTTAACGAACCCACTGCAGCTGCAT 1402536 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTA-TTTTAGTATTTGAT 451498 | || ||||| || | | ||||| || ||| | |||| | ||| |||||| Sbjct 1402535 TGGCTTATGG-------AATTGACAAGAAGCAAAAGGACGGAATAGTGGCAGTGTTTGAT 1402483 Query 451499 TTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTA 451558 || || ||||| || ||| | || | | || |||||||| || || ||||| Sbjct 1402482 TTGGGAGGAGGTACGTTTGACATATCAATTTTGGATATCGAAGATGGCGTGTTCGAAGTC 1402423 Query 451559 AAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 | || ||||| ||| | || ||||| || || ||||| Sbjct 1402422 AGAGCCACCAACGGTAACACCCATCTTGGTGGAGAAGA 1402385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717919036052