Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3 223 4e-53 >seq3 Length=2118207 Score = 223 bits (246), Expect = 4e-53 Identities = 1130/1761 (64%), Gaps = 69/1761 (4%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| ||||| | || ||||| | || | || ||||| || || || || || || Sbjct 1785667 GAAAGACCACAACATTTGATCATGAGAGTTTCCATTGGTATTCACGGTGACGACATCGAG 1785608 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACC 111725 || | || | ||| || |||||| | || | |||| ||||| | || || Sbjct 1785607 AAGGTCATCGAATCTTACAACTTGATGTCTCAACGTTTCTTCACCCACGGTTCTCCTACT 1785548 Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785 | |||||||||||||| ||| || |||||||| |||||||||| | |||| ||| Sbjct 1785547 TTGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCAATGAAG 1785488 Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAA 111841 || || || || |||| ||||||| ||| || |||| |||||| || || || Sbjct 1785487 GACGACTCTATTGATGGTATTTACGACAC-CT---TGAAGACCTGTGCCTTGATTTCCAA 1785432 Query 111842 GTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTA 111900 | | ||||||||||| || ||||||| || | || | | || || || ||| Sbjct 1785431 GAGTGCTGGTGGTATTGGTTTGCACATTCACAACATCCG-TTCTACTGGTGCTTACATTG 1785373 Query 111901 GAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 111960 ||||| || ||| || | ||||||||||||||| |||| || || ||| ||| | Sbjct 1785372 CTGGTACTAACGGTACCTCCAACGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTG 1785313 Query 111961 CGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTG 112014 | | || || |||||| ||| ||||| || || || | || | || | | Sbjct 1785312 CTAGATACGTTGACCAAGGTGGTAACAAGCGTC-CA--GGTGCTTTTGCCTTGTACTTGG 1785256 Query 112015 AGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGG 112074 ||||||||||||| || ||| | || ||| |||| | | || || ||| | || | Sbjct 1785255 AGCCATGGCACGCAGACATCTTCGACTTCATTGACATCAGAAAGAATCACGGTAAGGAAG 1785196 Query 112075 AGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGA 112133 | | | || | ||| | ||| | ||| | |||||||||||| | |||||||||||| Sbjct 1785195 A-AATCAGAGCTAGAGATTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGA 1785137 Query 112134 GTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGAT 112193 || || ||| ||| | ||| |||| || | |||| || | || || || | | || Sbjct 1785136 GTGGAACAGAATGGTGAATGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAA 1785077 Query 112194 GCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG---GAAGAAAGTCGGGCG 112250 | ||||| || || |||| | ||| | |||||| |||| ||| || | Sbjct 1785076 GTTTACGGTGACGAATTCGAAGAGTTATACGAACGTTACGAGAGAGAAGGAAG-AGGTAG 1785018 Query 112251 ACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 112310 | || || || ||| | ||||| | || || | || |||| || || || Sbjct 1785017 A-AGC-ACCGTCAAGGCTCAAAAGTTGTGGTACGCCATCTTGGAGGCTCAGACTGAAACC 1784960 Query 112311 GGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTG 112370 ||||| || | ||| | ||||| || ||||||||| | |||| || || ||||| ||| Sbjct 1784959 GGTACTCCTTTCATGTTGTACAAGGATGCCTGTAACAAGAAGACCAACCAGAAGAACTTG 1784900 Query 112371 GGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAG 112430 ||| | || ||| ||| ||| | ||| || ||| | || | | ||| || Sbjct 1784899 GGTATAATTAAGTCTTCTAACTTGTGTTGTGAGATCGTCGAGTACTCCTCTCCAGAGGAA 1784840 Query 112431 ACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAA 112489 ||||| ||||| | || || |||||| | || | || || || ||| || Sbjct 1784839 GTTGCTGTCTGTAATTTGGCCTCTATCGCTTTGCCATCTTTTGCTGAGAAGGATGAC-AA 1784781 Query 112490 GACATT-TG-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCT 112543 | | || || | | ||| || | || || || || || |||| || ||| | Sbjct 1784780 GTCTTTGTGGTACAACTTTGAGAAGTTGCATGACGTCACCAAGTCTGTTACCCGTAACTT 1784721 Query 112544 AAACAGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGA 112602 |||| | || || ||||| | ||||| ||| ||| || | |||||| | || Sbjct 1784720 GAACAAGATCATCGACAGAAACTACTACCCAGTTCCAGA-AGCCGAGAGATCTAACAAGA 1784662 Query 112603 GACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGC 112661 || | | ||||||| | ||||| |||||| | || || ||||| | ||| Sbjct 1784661 GAAATAGACCAATTGCCTTGGGTGTACAAGGTTTGGCCGACACTTTCATGGCATTGAGAT 1784602 Query 112662 CACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTAT 112721 || |||| || || | ||||| | ||| | || | || || ||||| || || Sbjct 1784601 TAC-CATTCGACTCTCAAGAAGCTAGAGAATTGAACATCCAAATCTTCGAGACCATCTAC 1784543 Query 112722 CACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 112781 |||| || | || || | |||||||| | || ||||| |||||| | | Sbjct 1784542 CACGGTGCCGTCGAAGCCTCTATTGAGTTGGCTTCCGAAGAAGGTCCTTATGAATCTTAC 1784483 Query 112782 GAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA- 112840 |||||||| ||||| || ||||| || | |||||||| ||||||| | || |||| Sbjct 1784482 GAGGGTTCCCCAGCATCTCAAGGTTTGTTACAATTTGACTTGTGGGAGAGAAAG-CCAAC 1784424 Query 112841 -GCTTCACTACGACTGGGACGCTCTCAAG--GAACGCATCAAGGAGAAGGGTCTTCGTAA 112897 | | | | |||||||| || | ||| ||| | | || | ||| | | || Sbjct 1784423 TGAGTTA-TGGGACTGGGATGCATTGAAGCAGAAGTTGGCCA--AGCACGGTTTGAGAAA 1784367 Query 112898 CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 112957 | | || | || ||||||||||| || || || | ||||| |||||||| || || Sbjct 1784366 CTCCTTGTTAGTTGCTCCAATGCCAACCGCTTCTACTTCTCAAATATTGGGTAACAACGA 1784307 Query 112958 ATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTG 113016 ||| || || || || || | |||||||| ||| |||||| | || ||||| || Sbjct 1784306 ATGTTTCGAGCCATATACTTCTAACATCTACTCT-AGAAGAGTGTTAGCAGGAGAATTCC 1784248 Query 113017 TGATTGTCAACAAGCAT-CTCG-TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGA 113074 || |||||| ||| || | || ||| | || | ||| ||||| | | | Sbjct 1784247 AAATCGTCAAC--CCATACTTGTTGCGTGATTTGGTCGATTTGGGTATCTGGAACGATGC 1784190 Query 113075 TATGAAGGATCTCA----TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTC 113130 |||||| | || | | | | | ||||| || || | | | | |||| Sbjct 1784189 CATGAAGAACAACATCATTTCTAACAAC----GGTTCTATCCAGACATTGGCTAACATTC 1784134 Query 113131 CAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTG 113190 ||||||| | ||| || ||| || |||||||||||| ||| || |||||| Sbjct 1784133 CAGATGAGCTCAAGGCCTTATACAAGACTGTTTGGGAAATCTCACAAAAGCATATCATTG 1784074 Query 113191 ACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCAT 113248 | ||||| || || | | | ||||||||||||| ||| ||| |||| ||||| Sbjct 1784073 ATATGGCTGCTGACAGAGCTGCCTTCATTGATCAA--TCACAGTCGTTGAA--CATTCAC 1784018 Query 113249 GGAAAG--TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGT 113306 ||| ||||| ||| ||||| | |||||||| | ||| |||||||||||||| Sbjct 1784017 ATCAAGGACCCAACAATGGGTAAGCTTACCTCTATGCATTTCTACGGTTGGAAGAAGGGT 1783958 Query 113307 CTCAAAACGGGGATGTATTAC 113327 | || || || ||||| ||| Sbjct 1783957 TTGAAGACTGGTATGTACTAC 1783937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742252573680