Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 183 4e-41 seq6 98.7 1e-15 seq1 84.2 3e-11 >seq3 Length=2118207 Score = 183 bits (202), Expect = 4e-41 Identities = 1163/1839 (63%), Gaps = 59/1839 (3%) Strand=Plus/Plus Query 109414 TAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTG 109473 || |||||||| || || | ||| |||||| |||| | |||||| || | || || Sbjct 1783938 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTA 1783997 Query 109474 GAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCA 109533 | ||| || || || | ||||| |||||| || ||||| ||||| | | Sbjct 1783998 CCCATTGTTGGGTCCTTGATGTGAATGTTCAACGACTGTGATTGATCAATGAAGGCAGCT 1784057 Query 109534 CGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAA 109593 | ||||| ||||| || |||||| |||||| |||||||| ||||||||||| || Sbjct 1784058 CTGTCAGCAGCCATATCAATGATATGCTTTTGTGAGATTTCCCAAACAGTCTTGTATAAG 1784117 Query 109594 TTCTTGATATCATCGGGAATGT---CCACGATGTTTTGAATAGAGCCACCAGCCTTCACC 109650 ||||| ||||| ||||||| ||| |||| | || |||| ||| || Sbjct 1784118 GCCTTGAGCTCATCTGGAATGTTAGCCA--ATGTCTGGA-TAGA---ACCGTTGTTAGAA 1784171 Query 109651 ATGAGATC---CTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT-CAACAAG 109706 |||| | |||||| | | ||||| ||| | | | ||| ||||||| Sbjct 1784172 ATGATGTTGTTCTTCATGGCATCGTTCCAGATACCCAAATCGACCAAATCACGCAACAAG 1784231 Query 109707 -ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCG 109765 ||| |||||| | ||||| || || | | || ||||||||||| | Sbjct 1784232 TATGG--GTTGACGATTTGGAATTCTCCTGCTAACACTCTTCTAGAGTAGATGTTAGAAG 1784289 Query 109766 TGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGG 109825 | || || |||||||| || ||||| || | ||||| | ||| ||||| || ||||| | Sbjct 1784290 TATATGGCTCGAAACATTCGTTGTTACCCAATATTTGAGAAGTAGAAGCGGTTGGCATTG 1784349 Query 109826 GAGCCA-TGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCC 109884 |||| | | | ||| ||||| | ||| | | | | | || || ||| ||| Sbjct 1784350 GAGCAACTAACAAGGA-GTTTCTCAAACCGTGCTTGGCCAACTTCTGCTTCAATGCATCC 1784408 Query 109885 CAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCC 109944 || || | | ||| | || | || | ||||||| || ||| | | ||| Sbjct 1784409 CAGTC----CCATAACTCAGTTGGCTTTCTC--TCCCACAAGTCAAATTGTAACAAACCT 1784462 Query 109945 TCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGAT 110004 | || || || ||||||| | || || || | || || | |||||||| Sbjct 1784463 TGAGATGCTGGGGAACCCTCGTAAGATTCATAAGGACCTTCTTCGGAAGCCAACTCAATA 1784522 Query 110005 GAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGAC 110064 || || || | || | || || || ||||| || || || |||| | || Sbjct 1784523 GAGGCTTCGACGGCACCGTGGTAGATGGTCTCGAAGATTTGGATGTTCAATTCTCTAGCT 1784582 Query 110065 TCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACATCCGCTAGACCCTGAACACC 110123 |||| | ||||||| || | | | ||| | || || || || | ||| || ||||| Sbjct 1784583 TCTTGAGAGTCGAATGGTA-ATCTCAATGCCATGAAAGTGTCGGCCAAACCTTGTACACC 1784641 Query 110124 GAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAA 110180 | |||| || | || || ||||||| | || | | |||| || ||||| | Sbjct 1784642 CAAGGCAATTGGTCTATTTCTCTTGTTAGATC-TCTCG--GCTTCTGGAACTGGGTAGTA 1784698 Query 110181 GTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT 110240 ||| | |||||||| | || | || || |||| ||| |||| ||||| | || Sbjct 1784699 GTTTCTGTCGATGATCTTGTTCAAGTTACGGGTAACAGACTTGGTGACGTCATGCAACTT 1784758 Query 110241 GTCGTAATCGAAC------GTTTTCGTC-TCCTTATTGACATATTTGGGGAGAGCAATAG 110293 || | | | || | || ||| ||||| | || | || | ||| |||| Sbjct 1784759 CTCAAAGTTGTACCACAAAGACTT-GTCATCCTTCTCAGCAAAAGATGGCAAAGCGATAG 1784817 Query 110294 ACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACA 110353 | || | ||| || |||| | || ||| || ||| || | || || ||||| Sbjct 1784818 AGGCCAAATTACAGACAGCAACTTCCTCTGGAGAGGAGTACTCGACGATCTCACAACACA 1784877 Query 110354 AGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCT 110413 |||| ||| |||||| | ||||||||||||||| || | || ||| || ||||||| Sbjct 1784878 AGTTAGAAGACTTAATTATACCCAAGTTCTTCTGGTTGGTCTTCTTGTTACAGGCATCCT 1784937 Query 110414 TATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACAT 110473 | || | |||| | || ||||| ||||| ||||| | || | ||||| | ||| | | Sbjct 1784938 TGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCCTCCAAGATGGCGTACCACAACT 1784997 Query 110474 CGGCGGCGGGGACAGTTGCGT-TAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCC 110532 || ||| || || | || | ||||| |||||| ||| || || Sbjct 1784998 TTTGAGCCTTGACGGT-GCTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATAACTCT 1785056 Query 110533 TCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGAC 110592 || ||||| | ||||| || || | | || || | || ||| |||| || | | Sbjct 1785057 TCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTC 1785116 Query 110593 CAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAA 110652 || | ||| || || || ||||||||||||| || |||||||||| || | ||| Sbjct 1785117 CATTCACCATTCTGTTCCACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAAC 1785176 Query 110653 AGGTCACG-GCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711 | || | || || ||||| | ||| || || | | || | ||||| | Sbjct 1785177 AAATCTCTAGCTCTGATT-TCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAA 1785235 Query 110712 GATATCCGAGTGCCATGGTTCGAGATAGACAGCGA-------TGGATCCCTTACGACGAC 110764 ||| || | ||||||||| || | || | || | |||| | ||| || || Sbjct 1785236 GATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACCTGGA-CGCTTGTTACCAC 1785294 Query 110765 CCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCAT 110824 | |||| ||| || | || ||| |||||||| | | ||| |||||||| || | Sbjct 1785295 CT---TGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGAATAATACCGT 1785351 Query 110825 CGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGGATATGC 110883 ||| ||| || ||||| ||| | | || | | | ||| |||| ||| || ||| Sbjct 1785352 TGGAGGTACCGTTAGTACCAGCAATGTAAGCACC-AGTAGAACGGATGTTGTGAATGTGC 1785410 Query 110884 ATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAAT 110942 | |||||||||||| || | ||| ||| ||||| ||| || || | ||||| Sbjct 1785411 AAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAG-GTGTCGTAAAT 1785469 Query 110943 ACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGG 111002 ||||||||| || || |||| | || | || || ||||||||||| || ||| || Sbjct 1785470 ACCATCAATAGAGTCGTCCTTCATTGCGACAAGGAAACAAGAAGACATTTGTGGAGATGG 1785529 Query 111003 CGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTT 111062 || || || ||||| | ||||| | | || |||| | || ||| |||||| ||| Sbjct 1785530 GGTACCAGCGTTGAACAAAGTAGGAGAACCGTGGGTGAAGAAACGTTGAGACATCAAGTT 1785589 Query 111063 GTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAA 111122 ||| | |||| | | || | ||||||||||||||||| ||||| ||||| Sbjct 1785590 GTAAGATTCGATGACCTTCTCGATGTCGTCACCGTGAATACCAATGGAAACTCTCATGAT 1785649 Query 111123 CATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAG 111182 || || ||| || |||| | ||| || | ||||| ||| || |||| | Sbjct 1785650 CAAATGTTGTGGTCTTTCAGCGACCTTACCGTTGACACGTAAAAGATACGATCTCTCCAA 1785709 Query 111183 GGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||||||| ||| ||||| | | ||||||||| || Sbjct 1785710 AGTCTTGAAACCGAAGTAGTTGTAGTTGAAATCACGGTC 1785748 >seq6 Length=1622446 Score = 98.7 bits (108), Expect = 1e-15 Identities = 275/416 (66%), Gaps = 11/416 (3%) Strand=Plus/Plus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647 |||||||||| |||||||| | | || || | || ||||||||||||||| | Sbjct 103789 TGTCGAAACCATCCATTTCGACCAATAATTGATTCAAGGTGGTTTCACGCTCATCGTTAG 103848 Query 11648 AG-----GGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAA 11702 ||||| | | | |||||||| ||||| | || ||||||||||||| || Sbjct 103849 CACCGCTGGCATTACCCTT--CGAACGCTGTTTACCAATGGCATCAATCTCATCGACAAA 103906 Query 11703 TACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCC 11762 || || | || || |||| || | ||| | ||||| || | || || Sbjct 103907 AACAATGGAAGGGGCATTTTCACGGGCAGTCTTGAACAAGTCACGCACTCTGGATGCACC 103966 Query 11763 AACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGAAT-GAAGGGAACATTAG 11821 ||||| || ||||| || ||||| | | ||||| ||||| | |||||||||| | Sbjct 103967 GACACCAACAAACATTTCGACGAACTCGGAACCAGAA-ACTGAGTAGAAGGGAACACCCG 104025 Query 11822 ACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAA 11881 ||| |||||| | |||| || | | ||||||||| ||||| || | ||||| | || Sbjct 104026 CCTCCCCAGCGGTTGCTCTGGCAATTAAAGTCTTACCAGTACCTGGAGGACCAGACAAAA 104085 Query 11882 GGGCGCCACGGGGGATCTTGGCACC-ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAG 11940 || || || |||||||| || || | || | || ||| || || | |||||| Sbjct 104086 TCGCACCTCGTGGGATCTTTGCTCCTAATTTTTCA-TATTTCTCTGGGTTTTGGAGGAAC 104144 Query 11941 TCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 | || | ||| || ||| |||||||| | ||||| ||||||| |||| Sbjct 104145 TTGACGAATTCCATAACTTCTTCCTTGGCTTCAGCCATACCAGCAACATCCTTGAA 104200 >seq1 Length=3149860 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/139 (74%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 158500 TCGGGTTTGGCTGTGAAGCACTGTAT--CAACGTTGGTGCGGGGGTCATCGATCCTGATT 158557 || ||||||||||| |||||| |||| |||| ||||| || || | ||| | || | Sbjct 2561767 TCCGGTTTGGCTGTCAAGCACGGTATTTCAACC--GGTGCTGGTGTGGTGGATGCCGACT 2561710 Query 158558 ATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACAAGGACTTTGAGGTTAAGA 158617 | | ||||| ||||| || ||||||| ||||| ||||||||||||| || ||| Sbjct 2561709 ACAGAGGAGAGGTCAAGGTGATTCTCTTTAATCACTCGGACAAGGACTTTGTAGTCGAGA 2561650 Query 158618 AGGGTGATCGCATCGCACA 158636 ||||||| | ||||| || Sbjct 2561649 AGGGTGACAGAATCGCCCA 2561631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975860118200