Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 248 1e-60 >seq3 Length=2118207 Score = 248 bits (274), Expect = 1e-60 Identities = 959/1482 (65%), Gaps = 51/1482 (3%) Strand=Plus/Plus Query 105925 TCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTT 105983 |||||| ||| |||||||| | || || || || || ||||| || |||||||| |||| Sbjct 1784267 TCTTCT-AGAGTAGATGTTAGAAGTATATGGCTCGAAACATTCGTTGTTACCCAATATTT 1784325 Query 105984 GTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCT 106043 | | || || || ||||||||||| || | || | ||| | | ||| | || Sbjct 1784326 GAGAAGTAGAAGCGGTTGGCATTGGAGCAACTAACAAGGAGTTTCTCAAACCGTG---CT 1784382 Query 106044 TGATGCG---TTC--CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCC 106096 || || ||| ||| | |||||||||| || | || | | |||| | ||| Sbjct 1784383 TG--GCCAACTTCTGCTTCAATGCATCCCAGTCCCATAACTCAGTTGGCTTTCTC--TCC 1784438 Query 106097 CACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAA 106156 |||| |||||||| | || ||||| || | || |||||||| | | ||||| | | Sbjct 1784439 CACAAGTCAAATTGTAACAAACCTTGAGATGCTGGGGAACCCTCGTAAGATTCATAAGGA 1784498 Query 106157 CCTTGGGCTTC---AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 106213 |||| |||| |||||| ||| || || | || |||| || ||||| || Sbjct 1784499 CCTT---CTTCGGAAGCCAACTCAATAGAGGCTTCGACGGCACCGTGGTAGATGGTCTCG 1784555 Query 106214 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA--- 106270 ||||| | |||| || | ||||| | || || |||| ||| | ||| Sbjct 1784556 AAGATTTGGATGTTCAATTCTCTAGCTTCTTGAGAGTCGAATG-GTAAT--CTCAATGCC 1784612 Query 106271 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC 106330 || || || || | |||||| |||||||| |||| ||||| | || | | ||||| Sbjct 1784613 ATGAAAGTGTCGGCCAAACCTTGTACACCCAAGGCAATTGGTCTATTTCTCTTGTTAGA- 1784671 Query 106331 TTTCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGT 106389 | || || ||| ||| || || | |||||||| |||| ||| | || ||| Sbjct 1784672 TCTCTCGGCTTCTGGAACTGGGTAGTAGTTTCTGTCGATGATCTTGTTCAAGTTACGGGT 1784731 Query 106390 AACAATCTTTGTGATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGTC-TCTTC 106443 |||| ||| |||| ||||| | || ||| | | || || | ||| || | Sbjct 1784732 AACAGACTTGGTGACGTCATGCAACTTCTCAAAGTTGTACCACAAAGACTTGTCATCCTT 1784791 Query 106444 ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC 106503 | || | ||| | ||||| || |||||||| || ||||| || || | Sbjct 1784792 CTCAGCAAAAGATGGCAAAGCGATAGAGGCCAAATTACAGACAGCAACTTCCTCTGGAGA 1784851 Query 106504 TGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 106563 | |||||| | || || ||||||||| ||| |||||| | ||||| ||||| || Sbjct 1784852 GGAGTACTCGACGATCTCACAACACAAGTTAGAAGACTTAATTATACCCAAGTTCTTCTG 1784911 Query 106564 GTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623 ||| |||| ||||| || ||||||||||| | |||| | || || || || || ||||| Sbjct 1784912 GTTGGTCTTCTTGTTACAGGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTG 1784971 Query 106624 TGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCT 106682 | || | || || | ||||| | | | | || | || || | | | ||| | Sbjct 1784972 AGCCTCCAAGATGGCGTACCACAACTTTTGAGCCTTG-ACGGTGCTTCTACCTCTTCCTT 1785030 Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742 | |||||| | ||| | |||| || || ||||| | || | | |||| Sbjct 1785031 CTCTCTCGTAACGTTCGTATAACTCTTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTG 1785090 Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802 | || | || |||| ||||||||| ||||| |||| || || || | ||||||||| | Sbjct 1785091 GAGCTTCGTTTGGAGAGAAAAGAGTCCATTCACCATTCTGTTCCACTCTCTTCATGAACA 1785150 Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGG 106861 ||||||||||||| | || || | ||||||| | | || ||||| | ||| || Sbjct 1785151 AATCTGGAATCCACAAAGCTGGGAACAAATCTCTAGCTCTGA-TTTCTTCCTTACCGTGA 1785209 Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921 || || | |||| ||| || | ||| || |||||||||||||| | || | || Sbjct 1785210 TTCTTTCTGATGTCAATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCA 1785269 Query 106922 ATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAAT 106975 | || || | ||||| ||| |||| | || || | || ||| ||| || Sbjct 1785270 AAAGCACC---TGGACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAG 1785326 Query 106976 ACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTA 107035 || |||| ||||||||||||||| | || ||| || || || ||| || | Sbjct 1785327 ACACGAACCATTGGAATAATACCGTTGGAGGTACCGTTAGTACCAGCAATGTAAGCACCA 1785386 Query 107036 TTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCA 107095 | | | | | || ||||||| |||||||| ||||| | ||| || || ||| Sbjct 1785387 GTAGAACGGATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCA 1785446 Query 107096 CACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAG 107155 || | | | || | || ||||| | || ||||| ||||| | |||| |||||| Sbjct 1785447 CAGGTCTTCAAGGTGTCGTAAATACCATCAATAGAGTCGTCCTTCATTGCGACAAGGAAA 1785506 Query 107156 CAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATG 107215 ||| ||||| || || ||| |||||||| ||||| | || || | |||| || Sbjct 1785507 CAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTGAACAAAGTAGGAGAACCGTGGGTG 1785566 Query 107216 AACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275 || | || ||| |||||| || ||| | || | ||| || ||||| || ||||| Sbjct 1785567 AAGAAACGTTGAGACATCAAGTTGTAAGATTCGATGACCTTCTCGATGTCGTCACCGTGA 1785626 Query 107276 ATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGC 107335 || || |||| || | ||| | || | ||| ||| |||| || | || | || Sbjct 1785627 ATACCAATGGAAACTCTCATGATCAAATGTTGTGGTCTTTCAGCGACCTTACCGTTGACA 1785686 Query 107336 CGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 ||| |||||| | || |||| | || |||| ||| ||||| Sbjct 1785687 CGTAAAAGATACGATC-TCTCCAAAGTCTTGAAACCGAAGTA 1785727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980659879560