Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 1e-15
>seq1
Length=3149860
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104894 ACAAATTCTAACTTGTTAAATGAAATTGGTGTTAAAGTATGGAATGATAATGGTTCACGT 104953
||| || | || ||||| | |||| || || || | ||| | | || || || |||
Sbjct 1358974 ACAGATGCCAAGTTGTTGAGCGAAAAAGGCGTAAAGATCTGGGAAGGAAACGGATCTCGT 1358915
Query 104954 AAGTTTTTAGATTCTTGTGGATTTCACTTTC-GAAAAGAAGGTGATTTAGGACCAATTTA 105012
|||| || || | ||| ||| ||| | | | |||||||||||| |||||| ||||
Sbjct 1358914 GAGTTCTTGGACAAGT-TGGGTTTGACTGACCGTAGAGAAGGTGATTTGGGACCAGTTTA 1358856
Query 105013 TGGATTTCAATGGAGACATGCTGGAGCTCAATATATCGACTGTGATACCGACTATACCGG 105072
||||| |||||||||||| |||||| |||| | || ||||| || ||||| |||||
Sbjct 1358855 CGGATTCCAATGGAGACATTTCGGAGCTGAATACAAGGATTGTGACACAGACTACACCGG 1358796
Query 105073 CCAAGGTATAGACCAATT 105090
||||| | ||||| ||
Sbjct 1358795 TCAAGGATTTGACCAGTT 1358778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658403043629240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |