Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 109 4e-19 >seq1 Length=3149860 Score = 109 bits (120), Expect = 4e-19 Identities = 210/307 (68%), Gaps = 2/307 (1%) Strand=Plus/Plus Query 29986 CTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30045 |||||||| ||||| || | | ||| || || || | |||||| ||| |||||| Sbjct 1358649 CTCACGTAGAACTGGCAGAAGACGTGACATGGTGGCAAAGCCATCTTGCCAAAGTCTGGT 1358708 Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105 || ||||| ||| ||| ||| || | ||||| | ||| || || | | | | | Sbjct 1358709 GGATTCCAAGCGGACATGATAATTCTTCTGTCGTATGGATTCGTCTTTAACTTCTTGATG 1358768 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTC 30164 | | ||||| ||| || | || || | |||||||| ||| ||| |||| || Sbjct 1358769 ACATCTTGCAACTGGTCAAATCCTTGACCGGTGTAGTCTGTG-TCACAATCCTTGTATTC 1358827 Query 30165 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30224 ||||||||||| ||||| ||||| ||||| || ||||||| || || ||| | || Sbjct 1358828 AGCTCCGAAATGTCTCCATTGGAATCCGTAAACTGGTCCCAAATCACCTTCTCTACGGTC 1358887 Query 30225 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30284 || ||| ||||||||| || || | || ||||| | |||||||||||||| || Sbjct 1358888 AGTCAAACCCAACTTGTCCAAGAACTCACGAGATCCGTTTCCTTCCCAGATCTTTACGCC 1358947 Query 30285 CTTCTCG 30291 || ||| Sbjct 1358948 TTTTTCG 1358954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617505379487