Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq9 140 3e-28 >seq9 Length=507287 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | |||||||| ||||| || ||||| ||||| || ||||| || | Sbjct 282578 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 282637 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || || ||||||||||| || || ||||| | ||||| || || ||| Sbjct 282638 AGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 282697 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || | || | |||||||||| || ||| Sbjct 282698 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATGGTGTCAGACGACTCGACT 282757 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| || || || || ||||| || || || || ||||| Sbjct 282758 TCAAGAGTGATAGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282804 Score = 138 bits (152), Expect = 9e-28 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | |||||||| ||||| || ||||| ||||| || ||||| || | Sbjct 282122 CCACCTCTCAATCTYAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 282181 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || || ||||||||||| || || ||||| | ||||| || || ||| Sbjct 282182 AGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGRTCTGGAGGA 282241 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || | || | |||||||| | ||| || Sbjct 282242 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATRGTGTCAGAAGATTCAACY 282301 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | || || || || ||||| || || || || ||||| Sbjct 282302 TCAAGAGTAATGGTCTTACCAGTCAAAGTCTTRACGAAGATTTGCAT 282348 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | ||||||||| ||||| || ||||| ||||| || ||||| || | Sbjct 281894 CCACCTCTCAATCTTAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 281953 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || || ||||||||||| || || ||||| | ||||| || || ||| Sbjct 281954 AGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 282013 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || | || | |||||||| | ||| || Sbjct 282014 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATGGTGTCAGAAGATTCAACC 282073 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | || || || || ||||| || || || || ||||| Sbjct 282074 TCAAGAGTAATGGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282120 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | |||||| || ||||| || ||||| ||||| || ||||| || | Sbjct 282806 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 282865 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||||||||||||| || || || ||||||||||| || || ||| Sbjct 282866 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCTGGAGGA 282925 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || | || | || || || | || ||| Sbjct 282926 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTATCGGAAGACTCAACT 282985 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || | || | || || |||||||| || || || || || ||||| || Sbjct 282986 TCCAAGGTAATGGTCTTACCGGTTAATGTCTTAACGAAGATTTGCATTGT 283035 Score = 125 bits (138), Expect = 6e-24 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | |||||||| ||||| || ||||| ||||| || ||||| || | Sbjct 282350 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 282409 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || || ||||||||||| || || || || | ||||| || || ||| Sbjct 282410 AGAGTTCTACCGTCTTCYAATTGCTTACCRGCGAARATYAAWCKYTGTTGRTCTGGAGGA 282469 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || | || | || || || | || || Sbjct 282470 ATACCTTCCTTGTCTTGGATCTTGGACTTRACGTTGTCAATRGTRTCRGAAGAYTCAACY 282529 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | || || || || || || || || || || ||||| Sbjct 282530 TCMARRGTAATGGTCTTACCRGTYAAWGTCTTRACGAAGATTTGCAT 282576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278308236783