Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 seq9 82.4 6e-11 >seq3 Length=2118207 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || ||||| || | ||| ||| || || || ||||| ||||| || ||| | |||| Sbjct 53427 AAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCT 53368 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 |||||||||||||| || || |||| || ||||| || | |||| || |||||||| Sbjct 53367 TCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCC 53308 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 ||||| || ||| | | | || || | ||| || |||| ||||| || Sbjct 53307 TGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTC 53248 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| || || ||||| ||||| Sbjct 53247 TTACCTGTTAAAGTCTTGACGAAAATTTGCAT 53216 >seq9 Length=507287 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/212 (68%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || || || || || ||| || ||||| || ||||| ||||| ||| ||| | |||| Sbjct 282137 AAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCT 282196 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 || || ||||||||||| || |||| || ||||| || | |||| || |||||||| Sbjct 282197 TCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGRTCTGGAGGAATACCTTCCTTGTCT 282256 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 ||||| || || | | | || || | || || || | ||||| || Sbjct 282257 TGGATCTTGGACTTAACGTTGTCAATRGTGTCAGAAGATTCAACYTCAAGAGTAATGGTC 282316 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| || || || || ||||| Sbjct 282317 TTACCAGTCAAAGTCTTRACGAAGATTTGCAT 282348 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| || || || || ||| || ||||| || ||||| ||||| ||| ||| | |||| Sbjct 282592 CAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTC 282651 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || || ||||||||||| || |||| || ||||| || | |||| || |||||||| Sbjct 282652 TTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 282711 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| || || | | | || |||| ||| || || | || || || Sbjct 282712 TTGGATCTTGGACTTAACGTTGTCAATGGTGTCAGACGACTCGACTTCAAGAGTGATAGT 282771 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| || || || || ||||| Sbjct 282772 CTTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937511789137