Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq3 159 2e-34
seq5 158 6e-34
>seq3
Length=2118207
Score = 159 bits (176), Expect = 2e-34
Identities = 293/424 (69%), Gaps = 4/424 (1%)
Strand=Plus/Plus
Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948
|||||| |||| | | ||| ||| |||| || || ||| ||| ||| || |||||||||
Sbjct 1785099 TTTGGAGAGAAAAGAGTCCATTCACCATTCTGTTCCACTCTCTTCATGAACAAATCTGGA 1785158
Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008
||||||| || || |||||||| ||||| |||||||| || |||||||||||| |
Sbjct 1785159 ATCCACAAAGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTCTTTCTG 1785218
Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068
| || | ||| || || || |||| ||||||||| || || || | |||||| ||||
Sbjct 1785219 ATGTCAATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACCT 1785278
Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128
| || |||||||| || |||||||| ||||| | ||||| || | ||||
Sbjct 1785279 GGACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATT 1785338
Query 26129 GGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187
|||| |||| | |||| | | ||||| || | | ||| | | || || || | ||
Sbjct 1785339 GGAA-TAATACCGTTGGAGGTACCGTTAGTACCAGCAATGTAAGCACCAGTAGAACGGAT 1785397
Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAAA 26246
| |||| || | ||| || |||||||| | || ||||| ||||| ||| ||
Sbjct 1785398 GTTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAA 1785457
Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATA 26306
|| ||| |||| || | || || | |||||| | | | ||||||||||| |
Sbjct 1785458 -GGTGTCGTAAATACCATCAATAGAGTCGTCCTTCATTGCGACAAGGAAACAAGAAGACA 1785516
Query 26307 ATTG 26310
|||
Sbjct 1785517 TTTG 1785520
Score = 89.7 bits (98), Expect = 3e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
|||||||| | || |||||||| | | ||| ||||| |||| || ||||||||
Sbjct 1784250 AATTCTCCTGCTAACACTCTTCTAGAGTAGATGTTAGAAGTATATGGCTCGAAACATTCG 1784309
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
|| || || || |||||||||||||| || ||||||||| || | ||| | || |||
Sbjct 1784310 TTGTTACCCAATATTTGAGAAGTAGAAGCGGTTGGCATTGGAGCAACTAACAAGGAGTTT 1784369
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179
|||||||| | || | | || || || ||| |||||| ||
Sbjct 1784370 CTCAAACCGTGCTTGGCCAACTTCTGCTTCAATGCATCCCAGTC 1784413
>seq5
Length=1730773
Score = 158 bits (174), Expect = 6e-34
Identities = 248/352 (70%), Gaps = 5/352 (1%)
Strand=Plus/Minus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
|| |||| | |||||| ||| | |||| | | ||| | ||||| || ||||| ||
Sbjct 1418025 ATCTGGAGAAAATAAAGACCATACTTCATTATTCCGTACTCTTTCCATGAACAAATCAGG 1417966
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||| | || ||||||| |||| || ||| | |||||| || ||||| ||||| ||
Sbjct 1417965 AATCCATAACCCAAAAAATAAGTCTCGCGTTCTGAGTTCTTCCTTGCCGTGGTTCTTCTT 1417906
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
| || |||| || || | || |||||||||||||| ||||| || || || |||
Sbjct 1417905 CAAGTCCAAGATCTCGAATACGTCAGAGTGCCATGGTTCCAAATATATGGCGAAGGCACC 1417846
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
| |||||| || || ||||| || || || || || |||||||| ||||| | |||
Sbjct 1417845 TGGTCTTTTGTTCCCTCCCTGATCAACATACCTCGCCGTATCATTGAATACTTTAAGCAT 1417786
Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCC-TGTCGATCTAA 26186
||||| |||||| ||| |||||| || || || | | ||| |||| ||| |
Sbjct 1417785 AGGAACCAATCCACTTGCCGTTCCGTTAGTACTGGCGATGTGAGCTCCGTGTC-CTCTTA 1417727
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT---AGCTGC 26235
||| |||| |||| | || ||||| || | | |||||||| ||||||
Sbjct 1417726 TATTGTGAACATGTAAGCCTATTCCTCCTGACGCCTTTGAAATTAAAGCTGC 1417675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039941405425
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |