Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 233 2e-56 >seq3 Length=2118207 Score = 233 bits (258), Expect = 2e-56 Identities = 1166/1820 (64%), Gaps = 69/1820 (4%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204 ||||| ||| |||| || | |||| || | |||||| ||| || | || | || Sbjct 1785727 TACTTCGGTTTCAAGACTTTGGAGA-GATCGTATCTTTTACGTGTCAACGGTAAGGTCGC 1785669 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 |||| ||||| | || ||||| | || | || || || ||||| || ||||| || Sbjct 1785668 TGAAAGACCACAACATTTGATCATGAGAGTTTCCATTGGTATTCACGGTGACGACATCGA 1785609 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAAC 75324 ||| | || | ||| || |||||| ||| || | |||| |||| | || || Sbjct 1785608 GAAGGTCATCGAATCTTACAACTTGATGTCTCAACGTTTCTTCACCCACGGTTCTCCTAC 1785549 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 | ||||| |||||||| ||| || || ||||| ||| |||||| |||| | || Sbjct 1785548 TTTGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCAATGAA 1785489 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 ||| ||||| || | ||||| || | || | | | ||||| || || ||| | Sbjct 1785488 GGACGACTCTATTGATGGTATTTACGACACCTTGAAGACCTGTGCCTTGATTTCCAAGAG 1785429 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 ||||| |||||||| ||||||| || | | | | | | || ||| || Sbjct 1785428 TGCTGGTGGTATTGGTTTGCACATTCACAACATCCGTTCTACTGGTGCTTACATTGCTGG 1785369 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || || ||| || | ||||||||||||||| |||| || || ||| ||| || | Sbjct 1785368 TACTAACGGTACCTCCAACGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTGCTAG 1785309 Query 75565 CTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618 || || | |||| || ||||| ||| | | | || | |||||||| || Sbjct 1785308 ATACGTTGACCAAGGTGGTAACAAGCGTCC--AGGTG-CTTTTGCCTTGTACTTGGAGCC 1785252 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 |||||| || || ||| | || ||| |||| | || || || ||| | ||||| Sbjct 1785251 ATGGCACGCAGACATCTTCGACTTCATTGACATCAGAAAGAATCACGGTAAGGAAGAAA- 1785193 Query 75679 TCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 || | | ||||||| | || || | ||||||||||||| | ||||||||| | || | Sbjct 1785192 TCAGAGCTAGAGATTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGAGTGG 1785133 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 | || |||| ||||| ||||||||| |||| || | || ||||| | | || | Sbjct 1785132 AACAGAATGGTGAATGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTTT 1785073 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCA-ATGC 75855 ||||| || || |||| | ||| | || || ||| || || |||| | | || Sbjct 1785072 ACGGTGACGAATTCGAAGAGTTATACGAACGTTACGAGAGA-GAAGGAAGAGGTAGAAGC 1785014 Query 75856 GACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 || || | || | | | ||| ||| | || || | | | ||||| || || || | Sbjct 1785013 -ACCGT-CAAGGCTCAAAAGTTGTGGTACGCCATCTTGGAGGCTCAGACTGAAACCGGTA 1784956 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 | || | ||| | ||||||||||| ||||||||||||| ||||| ||||| ||||| | Sbjct 1784955 CTCCTTTCATGTTGTACAAGGATGCCTGTAACAAGAAGACCAACCAGAAGAACTTGGGTA 1784896 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034 ||| ||| || || | || || || | |||||| | | || || | Sbjct 1784895 TAATTAAGTCTTCTAACTTGTGTTGTGAGATCGTCGAGTACTCCTCTCCAGAGGAAGTTG 1784836 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA-GACTCGCACT 76093 |||| || |||||||| || ||||| | ||| | || | | || ||| | | Sbjct 1784835 CTGTCTGTAATTTGGCCTCTATCGCTTTGCCATCTTTTGCTGAGAAGGATGACAAGTCTT 1784776 Query 76094 TTTG-----ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACC 76148 | || | | ||| || | ||||| |||| ||| ||||||| || | ||| Sbjct 1784775 TGTGGTACAACTTTGAGAAGTTGCATGACGTCACCAAGTCTGTTACCCGTAACTTGAACA 1784716 Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACAC 76207 |||| |||||||| | || || ||| ||| || || | ||||| | | || | Sbjct 1784715 AGATCATCGACAGAAACTACTACCCAGTTCCAGAAGCCGAGAGA-TCTAACAAGAGAAAT 1784657 Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT---TTTGTGCCGCTAC 76264 ||||| |||| |||||||| |||||| | || || || || ||| | ||| Sbjct 1784656 AGACCAATTGCCTTGGGTGTACAAGGTTTGGCCGACACTTTCATGGCATTGAG--ATTAC 1784599 Query 76265 GCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCAC 76324 |||| || || | ||||| | || |||| | ||||| || ||||| || ||| Sbjct 1784598 -CATTCGACTCTCAAGAAGCTAGAGAATTGAACATCCAAATCTTCGAGACCATCTACCAC 1784540 Query 76325 GCATCCCTGGAGGCGAGTTGTGAATTGGCT---GAAGCCCAAGGTTCCTATGAGACATTT 76381 | || | || || | ||| |||||| |||| ||||| | ||||| | | Sbjct 1784539 GGTGCCGTCGAAGCCTCTATTGAGTTGGCTTCCGAAG---AAGGTCCTTATGAATCTTAC 1784483 Query 76382 GAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAG 76441 |||||||| || || || ||||| || | || ||||| ||||||| | |||| | | Sbjct 1784482 GAGGGTTCCCCAGCATCTCAAGGTTTGTTACAATTTGACTTGTGGGA--GAGAAAGCCAA 1784425 Query 76442 CTCAACTA--CGACTGGGATGTTCTCAAG--GAACGCATCAAGGAGAAGGGTCTTCGTAA 76497 || | || |||||||||| | ||| ||| | | || | ||| | | || Sbjct 1784424 CTGAGTTATGGGACTGGGATGCATTGAAGCAGAAGTTGGCCA--AGCACGGTTTGAGAAA 1784367 Query 76498 CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 76557 | | || | || ||||||||||| || || || | ||||| |||||||| || || Sbjct 1784366 CTCCTTGTTAGTTGCTCCAATGCCAACCGCTTCTACTTCTCAAATATTGGGTAACAACGA 1784307 Query 76558 ATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGT 76617 ||| || || ||||| || | ||||||||| |||||| | ||||| || || Sbjct 1784306 ATGTTTCGAGCCATATACTTCTAACATCTACTCTAGAAGAGTGTTAGCAGGAGAATTCCA 1784247 Query 76618 CATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATT--GGTCTCTGGTCCAAGGAT 76675 || |||||| || | | ||| | | |||| ||| ||||| | | | Sbjct 1784246 AATCGTCAACCCATACTTGTTGCGTGA--TTTGGTCGATTTGGGTATCTGGAACGATGCC 1784189 Query 76676 ATGAAGGATCTCA----TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCC 76731 |||||| | || | | | | | ||||| || || | | | | || || Sbjct 1784188 ATGAAGAACAACATCATTTCTAACAAC----GGTTCTATCCAGACATTGGCTAACATTCC 1784133 Query 76732 AGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAG-ATGTCATTG 76790 |||||| ||||| | ||| || || ||||||||| | |||| || |||||| Sbjct 1784132 AGATGAGCTCAAGGCCTTATACAAGACTGTTTGGGAAATC-TCACAAAAGCATATCATTG 1784074 Query 76791 ACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCAT 76848 | ||||| || || | | | ||||||||||||| ||| ||| |||| ||||| Sbjct 1784073 ATATGGCTGCTGACAGAGCTGCCTTCATTGATCAA--TCACAGTCGTTGAA--CATTCAC 1784018 Query 76849 GGAAAG--TCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGG 76906 ||| ||||| ||| ||||| | ||||||||| | |||| ||||| |||| Sbjct 1784017 ATCAAGGACCCAACAATGGGTAAGCTTACCTCTATGCATTTCTACGGTTGGAAGAAGGGT 1783958 Query 76907 CTCAAAACCGGAATGTACTA 76926 | || || || |||||||| Sbjct 1783957 TTGAAGACTGGTATGTACTA 1783938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569458314720