Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq9 129 1e-24
seq3 104 5e-17
>seq9
Length=507287
Score = 129 bits (142), Expect = 1e-24
Identities = 172/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | ||| || || || | ||| | || || ||| || || |||
Sbjct 282803 ATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 282862
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| | || |||||||| |||||||| |||||||| | |||||| || ||
Sbjct 282863 GAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCTGGA 282922
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || || | ||| || || ||
Sbjct 282923 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTATCGGAAGACTCA 282982
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGA 192545
||||| | |||||||| ||||| |||||||| |||| || || |||||| |||||||
Sbjct 282983 ACTTCCAAGGTAATGGTCTTACCGGTTAATGTCTTAACGAAGATTTGCATTGTATTAGA 283041
Score = 109 bits (120), Expect = 1e-18
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || ||||| || | ||| | || || ||| || || |||
Sbjct 282119 ATACCACCTCTCAATCTYAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 282178
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| | || || ||||| ||||| || || || ||||| ||||| || ||
Sbjct 282179 GAAAGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGRTCTGGA 282238
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || || | || || |||||
Sbjct 282239 GGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATRGTGTCAGAAGATTCA 282298
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||||||||| |||||||| || || || | || || |||||
Sbjct 282299 ACYTCAAGAGTAATGGTCTTACCAGTCAAAGTCTTRACGAAGATTTGCAT 282348
Score = 105 bits (116), Expect = 1e-17
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | ||| ||||| || | ||| | || || ||| || || |||||
Sbjct 281893 ACCACCTCTCAATCTTAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 281952
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| |||| | || || ||||| ||||| || || || ||||| ||||| || || ||
Sbjct 281953 AAGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGG 282012
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || || || || || || | || || ||||| ||
Sbjct 282013 AATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATGGTGTCAGAAGATTCAAC 282072
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| ||||||||||| |||||||| || || |||| || || |||||
Sbjct 282073 CTCAAGAGTAATGGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282120
Score = 105 bits (116), Expect = 1e-17
Identities = 154/230 (67%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || ||||| || | ||| | || || ||| || || |||
Sbjct 282347 ATACCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 282406
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| | || || ||||| ||||| || || || || | ||||| || ||
Sbjct 282407 GAAAGAGTTCTACCGTCTTCYAATTGCTTACCRGCGAARATYAAWCKYTGTTGRTCTGGA 282466
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || || | || || || ||
Sbjct 282467 GGAATACCTTCCTTGTCTTGGATCTTGGACTTRACGTTGTCAATRGTRTCRGAAGAYTCA 282526
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | |||||||| ||||| || || || || | || || |||||
Sbjct 282527 ACYTCMARRGTAATGGTCTTACCRGTYAAWGTCTTRACGAAGATTTGCAT 282576
Score = 100 bits (110), Expect = 6e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || ||||| || | ||| | || || ||| || || |||
Sbjct 282575 ATACCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 282634
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| | || || ||||| ||||| || || || ||||| ||||| || ||
Sbjct 282635 GAAAGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGA 282694
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || || | || ||||| ||
Sbjct 282695 GGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATGGTGTCAGACGACTCG 282754
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| ||||| || || |||||||| || || |||| || || |||||
Sbjct 282755 ACTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282804
>seq3
Length=2118207
Score = 104 bits (114), Expect = 5e-17
Identities = 170/245 (69%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880
||||| || || |||||||||||||| || || || | || || ||||| |||||
Sbjct 1740810 AAACAGGCGAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAGAAAGTC 1740869
Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940
|| |||||||| || |||||||| || | ||| || || || |||||| || | |||
Sbjct 1740870 AAACCTGGCATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCACTGAAG 1740929
Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000
|| |||||||| || ||||| || | || |||| | || |||| | || ||
Sbjct 1740930 AAAATACCCTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCGTCGTCA 1740989
Query 50001 AATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCT 50060
| ||||| | | ||||| || || || ||| |||| | || || || || |||||
Sbjct 1740990 GAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATAGCA 1741049
Query 50061 TTAAA 50065
|| ||
Sbjct 1741050 TTGAA 1741054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479760340650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |