Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq9 111 1e-19
seq3 93.3 3e-14
>seq9
Length=507287
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||| || || || |||||| || ||||| |||||||| || ||
Sbjct 281893 ACCACCTCTCAATCTTAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 281952
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || ||||| || ||||| |||||||| | || || ||| | ||
Sbjct 281953 AAGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGG 282012
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| || || | | ||| | ||| | |||||| ||||| |
Sbjct 282013 AATACCTTCCTTGTCTTGGATCTT-GGACTTAACGTTGTCAATGGTGTCAGAAGATTCAA 282071
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| || || || ||||| || || || || || ||||| ||||||
Sbjct 282072 CCTCAAGAGTAATGGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCATA 282121
Score = 109 bits (120), Expect = 4e-19
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||| ||||| || |||||| || ||||| |||||||| || ||
Sbjct 282805 ACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 282864
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| |||||||| || || || || || |||||||| || ||| | ||
Sbjct 282865 AAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCTGGAGG 282924
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| || || | | || | ||| | ||| ||| || || |
Sbjct 282925 AATACCTTCCTTGTCTTGGATCTT-GGACTTGACGTTGTCAATGGTATCGGAAGACTCAA 282983
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
| || | || || || ||||| ||||| || || || ||||| ||||| ||
Sbjct 282984 CTTCCAAGGTAATGGTCTTACCGGTTAATGTCTTAACGAAGATTTGCATTGT 283035
Score = 107 bits (118), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || |||||| || ||||| |||||||| || ||
Sbjct 282121 ACCACCTCTCAATCTYAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 282180
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || ||||| || ||||| |||||||| | || || ||| | ||
Sbjct 282181 AAGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGRTCTGGAGG 282240
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| || || | | ||| | ||| | ||||| ||||| |
Sbjct 282241 AATACCTTCCTTGTCTTGGATCTT-GGACTTAACGTTGTCAATRGTGTCAGAAGATTCAA 282299
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| || || || ||||| || || || || || ||||| ||||||
Sbjct 282300 CYTCAAGAGTAATGGTCTTACCAGTCAAAGTCTTRACGAAGATTTGCATA 282349
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || |||||| || ||||| |||||||| || ||
Sbjct 282577 ACCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 282636
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || ||||| || ||||| |||||||| | || || ||| | ||
Sbjct 282637 AAGAGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGG 282696
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| || || | | ||| | ||| | |||||| || || |
Sbjct 282697 AATACCTTCCTTGTCTTGGATCTT-GGACTTAACGTTGTCAATGGTGTCAGACGACTCGA 282755
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| ||||| || ||||| || || || || || ||||| ||||||
Sbjct 282756 CTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCATA 282805
Score = 96.9 bits (106), Expect = 2e-15
Identities = 155/230 (67%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || |||||| || ||||| |||||||| || ||
Sbjct 282349 ACCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 282408
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || ||||| || || || || || || | || || ||| | ||
Sbjct 282409 AAGAGTTCTACCGTCTTCYAATTGCTTACCRGCGAARATYAAWCKYTGTTGRTCTGGAGG 282468
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| || || | | || | ||| | || || || || |
Sbjct 282469 AATACCTTCCTTGTCTTGGATCTT-GGACTTRACGTTGTCAATRGTRTCRGAAGAYTCAA 282527
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || ||||| || || || || || ||||| ||||||
Sbjct 282528 CYTCMARRGTAATGGTCTTACCRGTYAAWGTCTTRACGAAGATTTGCATA 282577
>seq3
Length=2118207
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | ||| ||||| || | ||| ||| || || |||||||| || |
Sbjct 53444 CACCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAG 53385
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || || | |||| ||||| || || || || || ||||| | || || || | |
Sbjct 53384 AAAGGGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTG 53325
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | |||| ||| | ||||||| || ||
Sbjct 53324 GAATACCTTCCTTGTCCTGGATCTT-GGACTTGACATTGTCAATGGTGTCGGAGGACTCG 53266
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || ||||||||||| || || || || || |||||
Sbjct 53265 ACTTCCAAGGTAATGGTCTTACCTGTTAAAGTCTTGACGAAAATTTGCAT 53216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703923884480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |