Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 105 2e-17 >seq3 Length=2118207 Score = 105 bits (116), Expect = 2e-17 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 173106 GGCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTG 173165 ||| |||||||| | ||||| || |||| || | |||||| |||| ||| || Sbjct 1784930 GGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCCTCCAAGATGGCGTA 1784989 Query 173166 CCAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATA 173225 ||| | | ||| || || ||||| |||| ||||||||||| | ||||| | || || Sbjct 1784990 CCACAACTTTTGAGCCTTGACGGTGCTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTA 1785049 Query 173226 GAGGTCTTCGAAATCCTTCCCGTAAATTTC-GTCAAGACCGGGAGCTTCCTTCGGACAAA 173284 | |||||||| || | ||||||| ||| | |||| || |||||||| || ||| | | Sbjct 1785050 TAACTCTTCGAATTCGTCACCGTAAACTTCTGGCAAG-CCTGGAGCTTCGTTTGGAGAGA 1785108 Query 173285 AGAGACTCCAATTTCCA-TCGGTCTCGACCCTCTTCATGAA 173324 | ||| |||| | ||| || || || || ||||||||||| Sbjct 1785109 AAAGAGTCCATTCACCATTCTGT-TCCACTCTCTTCATGAA 1785148 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || || || |||||||| || || ||||| | || || ||| Sbjct 53240 ACAGGTAAGACCATTACCTTGGAAGTCGAGTCCTCCGACACCATTGACAATGTCAAGTCC 53299 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||| ||| || ||| |||||| | |||||||| || ||| Sbjct 53300 AAGATCCAGGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTCGCTGGTAAG 53359 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || || || | | || |||||| ||||||| ||||| || | ||| Sbjct 53360 CAGTTGGAAGACGGTAGAACCCTTTCTGACTACAACATCCAGAAGGAGTCCACCTTGCAC 53419 Query 206374 CTTGTTTTGAGA 206385 | || || ||| Sbjct 53420 TTGGTCTTAAGA 53431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820512300499