Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq9 93.3 4e-14 >seq9 Length=507287 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 || || || ||||| || || || || |||||| | |||| || ||| || ||| | ||| Sbjct 282027 GACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAA 281968 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | ||||| | | || ||||| || ||||| |||||||| |||| ||||| ||| Sbjct 281967 GACGGTAGAACTCTTTCTGACTACAACATCCAAAAGGAATCCACTCTTCACTTAGTTTTA 281908 Query 25388 AGATTGAGAGGAGG 25401 ||||||||||| || Sbjct 281907 AGATTGAGAGGTGG 281894 Score = 93.3 bits (102), Expect = 4e-14 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 || || || ||||| || || || || |||||| | |||| || ||| || ||| | ||| Sbjct 282255 GACAAGGAAGGTATTCCTCCAGAYCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAA 282196 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | ||||| | | || ||||| || ||||| |||||||| |||| ||||| || Sbjct 282195 GACGGTAGAACTCTTTCTGACTACAACATCCAAAAGGAATCCACTCTTCACTTAGTTTTR 282136 Query 25388 AGATTGAGAGGAGG 25401 ||||||||||| || Sbjct 282135 AGATTGAGAGGTGG 282122 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || || || || | ||||| | |||||||| | Sbjct 282804 ATGCAAATCTTCGTTAAGACTTTGACTGGTAAGACTATCACTCTTGAAGTCGAGTCGTCT 282745 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || || || || || || || ||||| || || || || Sbjct 282744 GACACCATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 282685 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | |||| || ||| || ||| | ||||| | ||||| | | || ||||| Sbjct 282684 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAAC 282625 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||| |||||||| |||| ||||| || ||||||||||| || Sbjct 282624 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTGAGATTGAGAGGTGG 282578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094294290080