Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 257 2e-63 seq6 87.8 2e-12 >seq3 Length=2118207 Score = 257 bits (284), Expect = 2e-63 Identities = 1163/1815 (64%), Gaps = 59/1815 (3%) Strand=Plus/Plus Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428 |||||||| || ||||| | || | ||||| |||| | ||||||||| | ||||| Sbjct 1783938 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTA 1783997 Query 110429 GACATCGTTGGACTTTCCATGAAGAG---GTTCAT--ACTTTGACTTTGGTCAATGAAGC 110483 ||| ||||| ||| ||| | | ||||| ||| ||| ||| ||||||||| Sbjct 1783998 CCCATTGTTGGG---TCCTTGATGTGAATGTTCAACGACTGTGA--TTGATCAATGAAGG 1784052 Query 110484 GCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA-ATTTCCCAAACTGTGCGA 110542 | | | || ||||||||||||| || ||| | | | ||||||||||| || Sbjct 1784053 CAGCTCTGTCAGCAGCCATATCAATGATATGCTTT-TGTGAGATTTCCCAAACAGTCTTG 1784111 Query 110543 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTC 110602 || | ||||| |||||||| || | | | ||||||| ||||| Sbjct 1784112 TATAAGGCCTTGAGCTCATCTGGAATGTTAGCCAATGTCTGGATAGAACCGTTGTTAGAA 1784171 Query 110603 ACCATGAGATCCTTCATATCCTTGGACCAGAGACC--AATCTTCTTGAGGTCATTGACGA 110660 | ||| | |||||| | | | ||||| ||| |||| | | ||| | | Sbjct 1784172 ATGATGTTGTTCTTCATGGCATCGTTCCAGATACCCAAATCGACCAAA--TCACGCAACA 1784229 Query 110661 GGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTG 110720 || |||||| || || || ||||| | |||||| ||||||||| | | Sbjct 1784230 AGTATGGGTTGACGATTTGGAATTCTCCTGCTAACACTCTTCTAGAGTAGATGTTAGAAG 1784289 Query 110721 TGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTG 110780 | ||||| || || ||||| || |||||||| ||||| | || || || |||||||||| Sbjct 1784290 TATATGGCTCGAAACATTCGTTGTTACCCAATATTTGAGAAGTAGAAGCGGTTGGCATTG 1784349 Query 110781 GTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC--CTTGAGAACATC 110838 | || | || | ||| | | ||| | || | | ||| ||| | |||| Sbjct 1784350 GAGCAACTAACAAGGAGTTTCTCAAACCGTGCT--TGGCCAACTTCTGCTTCAATGCATC 1784407 Query 110839 CCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGG 110896 |||||| || | || | | |||| | ||||||| |||||| || | || ||||| Sbjct 1784408 CCAGTCCCATAACTCAGTTGGCTTTCTC--TCCCACAAGTCAAATTGTAACAAACCTTGA 1784465 Query 110897 GACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC---AGCCAATTCACAG 110953 || || || |||||||| | | |||||| | ||||| |||| |||||| ||| Sbjct 1784466 GATGCTGGGGAACCCTCGTAAGATTCATAAGGACCTT---CTTCGGAAGCCAACTCAATA 1784522 Query 110954 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 111013 || || | || |||| || ||||| || ||||| | |||| || | ||| Sbjct 1784523 GAGGCTTCGACGGCACCGTGGTAGATGGTCTCGAAGATTTGGATGTTCAATTCTCTAGCT 1784582 Query 111014 TCATCTGAATCAAATGCGTAGCGGCACAAA---ATAAATACATCCGCGAGACCTTGAACA 111070 || | || || |||| ||| | ||| || || || || | |||||| ||| Sbjct 1784583 TCTTGAGAGTCGAATG-GTAAT--CTCAATGCCATGAAAGTGTCGGCCAAACCTTGTACA 1784639 Query 111071 CCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAA 111129 ||||| |||| ||||| | || | | ||||| | || || ||| ||| || || | Sbjct 1784640 CCCAAGGCAATTGGTCTATTTCTCTTGTTAGA-TCTCTCGGCTTCTGGAACTGGGTAGTA 1784698 Query 111130 ATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTT 111189 |||||||| |||| ||| | || ||||||| ||| |||| ||||| | || Sbjct 1784699 GTTTCTGTCGATGATCTTGTTCAAGTTACGGGTAACAGACTTGGTGACGTCATGCAACTT 1784758 Query 111190 TTCATAAT-----CAAAAGTGCGAGTC-TCTTCATTGACATACTTTGGAAGGGCGATTGA 111243 ||| | | || || | ||| || | | || | ||| | ||||| || Sbjct 1784759 CTCAAAGTTGTACCACAAAGACTTGTCATCCTTCTCAGCAAAAGATGGCAAAGCGATAGA 1784818 Query 111244 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAA 111303 |||||||| || ||||| || || | | |||||| | || || ||| || Sbjct 1784819 GGCCAAATTACAGACAGCAACTTCCTCTGGAGAGGAGTACTCGACGATCTCACAACACAA 1784878 Query 111304 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTT 111363 ||| ||| |||||| | ||||| ||||| ||||| |||||||||| || |||||||| Sbjct 1784879 GTTAGAAGACTTAATTATACCCAAGTTCTTCTGGTTGGTCTTCTTGTTACAGGCATCCTT 1784938 Query 111364 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACAT 111422 ||| | |||| | || || || || || ||||| | | | || || | ||| ||| | Sbjct 1784939 GTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCCTCCAAGATGGCGTACCACAACTT 1784998 Query 111423 CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTT 111482 | | || | || || | | | ||| || |||||| | ||| | ||| Sbjct 1784999 TTGAGCCTTG-ACGGTGCTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATAACTCTT 1785057 Query 111483 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACC 111542 | || || ||||| | || | | ||||| || | || |||| ||||||||| || Sbjct 1785058 CGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCC 1785117 Query 111543 ATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 111602 ||| |||| | || || | ||||||||| | ||||||||||||| | || || | Sbjct 1785118 ATTCACCATTCTGTTCCACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACA 1785177 Query 111603 GATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 111661 ||||||| | | || ||||| | ||| || || || | |||| ||| || | | Sbjct 1785178 AATCTCTAGCTCTGA-TTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAG 1785236 Query 111662 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCA 111715 || || |||||||||||||| | || | || | || || | ||||| ||| Sbjct 1785237 ATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACC---TGGACGCTTGTTACCA 1785293 Query 111716 GCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCT 111775 |||| | || || | || ||| ||| || || |||| ||||||||||||||| | Sbjct 1785294 CCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGAATAATACCGTTG 1785353 Query 111776 GATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATC 111835 || ||| || || || ||| || | | | | | | || ||||||| Sbjct 1785354 GAGGTACCGTTAGTACCAGCAATGTAAGCACCAGTAGAACGGATGTTGTGAATGTGCAAA 1785413 Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 |||||||| ||||| | ||| || || ||||| | | | || | || ||||| Sbjct 1785414 CCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGGTGTCGTAAATACCA 1785473 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | || ||||| ||||| | |||| |||||| ||| ||||| || || ||| ||| Sbjct 1785474 TCAATAGAGTCGTCCTTCATTGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTA 1785533 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTAT 112015 ||||| ||||| | || || | |||| |||| | || ||| |||||| || ||| Sbjct 1785534 CCAGCGTTGAACAAAGTAGGAGAACCGTGGGTGAAGAAACGTTGAGACATCAAGTTGTAA 1785593 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 | || | ||| || ||||| || ||||| || || || | || | ||||| || Sbjct 1785594 GATTCGATGACCTTCTCGATGTCGTCACCGTGAATACCAATGGAAACTCTCATGATCAAA 1785653 Query 112076 TACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGT 112134 | ||||| |||| || | || | || ||| |||||| | || |||| | || Sbjct 1785654 TGTTGTGGTCTTTCAGCGACCTTACCGTTGACACGTAAAAGATACGATC-TCTCCAAAGT 1785712 Query 112135 TTTGAGACCAAAGTA 112149 |||| ||| ||||| Sbjct 1785713 CTTGAAACCGAAGTA 1785727 >seq6 Length=1622446 Score = 87.8 bits (96), Expect = 2e-12 Identities = 332/510 (65%), Gaps = 17/510 (3%) Strand=Plus/Plus Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512 ||||||||||| || | | | ||| | ||| | |||||| | | ||||| | || Sbjct 103707 TCAAAACGACCAGGTCTCAATAAGGCTTTATCCAAGATATCAGCTCTGTTAGTACCTGCC 103766 Query 11513 ATAACCACAATGCCAGTCTCAT-TGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAAT 11571 | ||| || | | |||| | |||| || |||||||| ||| | ||||||||| | Sbjct 103767 AAAACAACGACGTG-GTCTGAGGTGTCGAAACCATCCATTTCGACCAATAATTGATTCAA 103825 Query 11572 TGTTTGTTCTCTCTCATCATTTGC-----TGGCAT-ACCACCAGCACTGCGTTGCTTGCC 11625 || ||| | |||||| || || |||||| ||| | || | || || || Sbjct 103826 GGTGGTTTCACGCTCATCGTTAGCACCGCTGGCATTACCCTTCGAAC---GCTGTTTACC 103882 Query 11626 CACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAA 11685 | |||||||||||||| | || ||||| | || |||||| ||||| | | || Sbjct 103883 AATGGCATCAATCTCATCGACAAAAACAATGGAAGGGGCATTTTCACGGGCAGTCTTGAA 103942 Query 11686 GAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGA 11745 | || || || || ||||| |||||||||||||| || || || | | |||| Sbjct 103943 CAAGTCACGCACTCTGGATGCACCGACACCAACAAACATTTCGACGAACTCGGAACCAGA 104002 Query 11746 GCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTC 11804 |||| | ||| || ||| | || || ||| | |||| ||| | | ||||| | Sbjct 104003 -AACTGAGTAGAAGGGAACACCCGCCTCCCCAGCGGTTGCTCTGGCAATTAAAGTCTTAC 104061 Query 11805 CCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAA 11862 | |||||||| ||| | | || || ||||| |||||||| || || | || | Sbjct 104062 CAGTACCTGGAGGACCAGACAAAATCGCACCTCGTGGGATCTTTGCTCCTAATTTTTCAT 104121 Query 11863 ATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTC 11922 || ||||| ||||| | ||| || | || | || || ||| || ||||| | | Sbjct 104122 ATTTCTCT-GGGTT-TTGGAGGAACTTGACGAATTCCATAACTTCTTCCTTGGCTTCAGC 104179 Query 11923 AATCCCCTCAACATCACTGAAGCGGGTTTT 11952 || || ||||||| |||| | | |||| Sbjct 104180 CATACCAGCAACATCCTTGAATCTGATTTT 104209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031850842400