Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 190 3e-43 seq6 93.3 5e-14 seq5 86.0 8e-12 >seq3 Length=2118207 Score = 190 bits (210), Expect = 3e-43 Identities = 894/1406 (64%), Gaps = 39/1406 (3%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| || | || |||||||| || || || ||||||||||| ||||| | || || Sbjct 1784277 TAGATGTTAGAAGTATATGGCTCGAAACATTCGTTGTTACCCAATATTTGAGAAGTAGAA 1784336 Query 118242 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGT 118298 || || ||||| || || | | | |||| ||| | | ||| | || || | | | Sbjct 1784337 GCGGTTGGCATTGGAGCAACTAACAAGGA-GTTTCTCAAACCGTGCTTGGCCAACTTC-- 1784393 Query 118299 TCCTTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356 | ||| | || |||||||| || | || ||| || | || ||||| ||||| | Sbjct 1784394 TGCTTCAATGCATCCCAGTCCCATAACTCAG--TTGGCTTTCTCTCCCACAAGTCAAATT 1784451 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 | | | |||||| || ||||| || ||||| | | ||||| || || || | | Sbjct 1784452 GTAACAAACCTTGAGATGCTGGGGAACCCTCGTAAGATTCATAAGGACCTTCTTCGGAAG 1784511 Query 118417 CCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCAT 118473 |||| || ||| || |||| ||| |||| || || || || || || | | Sbjct 1784512 CCAACTCAATAGAG---GCTTCGACGGCACCGTGGTAGATGGTCTCGAAGATTTGGATGT 1784568 Query 118474 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGA 118533 ||| | | | || || | || || || | | || | || || || || | Sbjct 1784569 TCAATTCTCTAGCTTCTTGAGAGTCGAATGGTAATCTCAATGCCATGAAAGTGTCGGCCA 1784628 Query 118534 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA 118593 |||||| ||||| | | ||||||| | || |||| | ||||| || || ||| | Sbjct 1784629 AACCTTGTACACCCAAGGCAATTGGTCTATTTCTCTTGTTAGATCTCTCGGCT-TCTGGA 1784687 Query 118594 -CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652 | || || | || || ||||| | | | || | || ||| ||| ||| |||| Sbjct 1784688 ACTGGGTAGTAGTTTCTGTCGATGATCTTGTTCAAGTTACGGGTAACAGACTTGGTGACG 1784747 Query 118653 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA----- 118707 ||||| | ||| || | | | | || || |||| | | || || || Sbjct 1784748 TCATGCAACTTCTCAAAGTTGTACCACAAAGACTTGTCAT---CCTTCTCAGCAAAAGAT 1784804 Query 118708 GG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || ||||| || |||| |||||| |||| || || | | |||||| | Sbjct 1784805 GGCAAAGCGATAGAGGCCAAATTACAGACAGCAACTTCCTCTGGAGAGGAGTACTCGACG 1784864 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || |||||||| ||| |||||| | ||||||||||| || || | ||| || Sbjct 1784865 ATCTCACAACACAAGTTAGAAGACTTAATTATACCCAAGTTCTTCTGGTTGGTCTTCTTG 1784924 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 ||||| ||||||||||| | |||| | || || || || || || || | || | || Sbjct 1784925 TTACAGGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCCTCCAAGATG 1784984 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 || | ||| | | ||| || ||| | ||| || ||| |||||| | Sbjct 1784985 GCGTACCACAACTTTTGAGCCTTGACGGTGCTTCTACCTCTTCCTTCTCTCTCGTAACGT 1785044 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003 ||| | |||| || || ||||| | |||| | ||||| || | | ||| Sbjct 1785045 TCGTATAACTCTTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGA 1785104 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 |||| |||| ||||| |||| || || || | ||||||||| | ||||| ||||| Sbjct 1785105 GAGAAAAGAGTCCATTCACCATTCTGTTCCACTCTCTTCATGAACAAATCTGGAATCCAC 1785164 Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 | || | ||| | ||| | | | |||||| | || ||||| | | || Sbjct 1785165 AAAGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGATGTCA 1785224 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA 119183 | ||||| | ||| || |||||||| || |||| ||||| || | | | ||| || Sbjct 1785225 ATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAG-CACCTG--GA 1785281 Query 119184 CG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGA 119237 || |||| | |||| || || || |||||| ||| || ||||||| ||||||| Sbjct 1785282 CGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGA 1785341 Query 119238 ATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCG 119297 || ||||| | ||| || || || || ||| || | | | | || | | Sbjct 1785342 ATAATACCGTTGGAGGTACCGTTAGTACCAGCAATGTAAGCACCAGTAGAACGGATGTTG 1785401 Query 119298 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 119357 || ||||||| ||||||||| || || | ||| || || || || | | | || Sbjct 1785402 TGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGGTG 1785461 Query 119358 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGA 119417 |||| || ||||| || ||||| |||| |||||| ||||| || |||||||| Sbjct 1785462 TCGTAAATACCATCAATAGAGTCGTCCTTCATTGCGACAAGGAAACAAGAAGACATTTGT 1785521 Query 119418 GGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGAC 119477 || || |||||||||||||| | ||| || | ||||| |||| | || ||| ||| Sbjct 1785522 GGAGATGGGGTACCAGCGTTGAACAAAGTAGGAGAACCGTGGGTGAAGAAACGTTGAGAC 1785581 Query 119478 ATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACC 119537 ||| || ||| | || | ||| ||||| || ||||||||||| || || || Sbjct 1785582 ATCAAGTTGTAAGATTCGATGACCTTCTCGATGTCGTCACCGTGAATACCAATGGAAACT 1785641 Query 119538 CGCATAAACATGTATTGGGGTGTTTC 119563 | ||| | || | ||| ||| |||| Sbjct 1785642 CTCATGATCAAATGTTGTGGTCTTTC 1785667 >seq6 Length=1622446 Score = 93.3 bits (102), Expect = 5e-14 Identities = 268/408 (66%), Gaps = 11/408 (3%) Strand=Plus/Plus Query 14066 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 14125 ||||| ||||| || | | | ||| | || | ||||||| | ||| || | || Sbjct 103707 TCAAAACGACCAGGTCTCAATAAGGCTTTATCCAAGATATCAGCTCTGTTAGTACCTGCC 103766 Query 14126 ATGACAACGATGCCCGTCTC-GTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 14184 | ||||||| | |||| | | || || |||||||| || ||| | |||||| | Sbjct 103767 AAAACAACGACGTG-GTCTGAGGTGTCGAAACCATCCATTTCGACCAATAATTGATTCAA 103825 Query 14185 GGTTTGTTCGCGTTCATCATTCGCA-----GGCAT-ACCACCCGCACTGCGTTGCTTACC 14238 ||| ||| || ||||| || ||| ||||| ||| || || | || ||||| Sbjct 103826 GGTGGTTTCACGCTCATCGTTAGCACCGCTGGCATTACCCTTCGAAC---GCTGTTTACC 103882 Query 14239 GACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAA 14298 | ||| ||||| ||||||| ||||| || | || ||||||||||||| | || Sbjct 103883 AATGGCATCAATCTCATCGACAAAAACAATGGAAGGGGCATTTTCACGGGCAGTCTTGAA 103942 Query 14299 GATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGA 14358 | || |||||||| ||||||||||| |||||||| || || || | || | || Sbjct 103943 CAAGTCACGCACTCTGGATGCACCGACACCAACAAACATTTCGACGAACTCGGAACCAGA 104002 Query 14359 ACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 14418 | | | |||||| || | || || ||| | |||| ||| | | ||||| || Sbjct 104003 AACTGAGTAGAAGGGAACACCCGCCTCCCCAGCGGTTGCTCTGGCAATTAAAGTCTTACC 104062 Query 14419 CGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 || ||||| || | | || ||||| ||||||||| | || || Sbjct 104063 AGTACCTGGAGGACCAGACAAAATCGCACCTCGTGGGATCTTTGCTCC 104110 >seq5 Length=1730773 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781 ||||||||||| | ||||| ||| || ||||| | |||||| |||||| ||| Sbjct 1418300 AGATTACACACCGCTGTCTCTTCCGGCGAAGAATACTCCACAATTTCGCAGCACAAATTT 1418241 Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841 || ||| || |||||||| ||||||||||||| ||||| ||||||||||| Sbjct 1418240 GAGGACTTGATTACACCCAAGTTGCTTTGATTTGACTTCAAATTACAGGCATCCTTGTAT 1418181 Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 | ||||||||| || || || ||||| || Sbjct 1418180 AACATGTATGGACCACCTGTTTCTGTTTGTGA 1418149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435053121640