Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 219 5e-52 >seq3 Length=2118207 Score = 219 bits (242), Expect = 5e-52 Identities = 1118/1754 (64%), Gaps = 55/1754 (3%) Strand=Plus/Minus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| ||||| | || ||||| | || |||| |||||||| || || ||||| || Sbjct 1785667 GAAAGACCACAACATTTGATCATGAGAGTTTCCATTGGTATTCACGGTGACGACATCGAG 1785608 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 104335 ||| | || | ||| || |||||| ||| || | |||| |||| | || || Sbjct 1785607 AAGGTCATCGAATCTTACAACTTGATGTCTCAACGTTTCTTCACCCACGGTTCTCCTACT 1785548 Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395 | ||||| |||||||| ||| || |||||||| ||| |||||| |||| | ||| Sbjct 1785547 TTGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCAATGAAG 1785488 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 || ||||| || | ||||| || | || | | | ||||| || || ||| | Sbjct 1785487 GACGACTCTATTGATGGTATTTACGACACCTTGAAGACCTGTGCCTTGATTTCCAAGAGT 1785428 Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 ||||| |||||||| ||||||| || | | | | | | || ||| || Sbjct 1785427 GCTGGTGGTATTGGTTTGCACATTCACAACATCCGTTCTACTGGTGCTTACATTGCTGGT 1785368 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || || ||| || | ||||||||||||||| |||| || || ||| ||| || | Sbjct 1785367 ACTAACGGTACCTCCAACGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTGCTAGA 1785308 Query 104576 TATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 || || | |||| ||| ||||| | || || | || | || | |||||| Sbjct 1785307 TACGTTGACCAAGGTGGTAACAAGCGTCCA---GGTGCTTTTGCCTTGTACTTGGAGCCA 1785251 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 |||||||| || ||| | || ||| |||| | | || || ||| | || || Sbjct 1785250 TGGCACGCAGACATCTTCGACTTCATTGACATCAGAAAGAATCACGGTAAGGAAGAAAT- 1785192 Query 104690 CGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748 | | || | ||| | ||| | ||| | |||||||||||| | |||||||||||||| || Sbjct 1785191 CAGAGCTAGAGATTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGAGTGGA 1785132 Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT 104808 ||| ||| | ||| |||| || | |||| || | || || || | | || | Sbjct 1785131 ACAGAATGGTGAATGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTTTA 1785072 Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC 104868 ||||| || || |||| | ||| | |||||| |||||| | | | || Sbjct 1785071 CGGTGACGAATTCGAAGAGTTATACGAACGTTACGAGAGAGAAGGAAGAGGTAGAAGCAC 1785012 Query 104869 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 || ||| | ||||| | || || | || |||| || || || ||||| || Sbjct 1785011 CGTCAAGGCTCAAAAGTTGTGGTACGCCATCTTGGAGGCTCAGACTGAAACCGGTACTCC 1784952 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | |||| | ||||| || ||||||||| | |||| || || ||||| |||||| | || Sbjct 1784951 TTTCATGTTGTACAAGGATGCCTGTAACAAGAAGACCAACCAGAAGAACTTGGGTATAAT 1784892 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 ||| ||| || | ||| || ||| | || | | ||| || ||||| Sbjct 1784891 TAAGTCTTCTAACTTGTGTTGTGAGATCGTCGAGTACTCCTCTCCAGAGGAAGTTGCTGT 1784832 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATT-T 105106 ||||| | || || |||||| | || | || || || ||||| | | || | Sbjct 1784831 CTGTAATTTGGCCTCTATCGCTTTGCCATCTTTTGCTGAGAAGGATGACAA-GTCTTTGT 1784773 Query 105107 GAT-----TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161 | | | ||| || | || || || || || |||| ||| ||| | |||| Sbjct 1784772 GGTACAACTTTGAGAAGTTGCATGACGTCACCAAGTCTGTTACCCGTAACTTGAACAAGA 1784713 Query 105162 TTATTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGT 105220 | || || ||||| | ||||| ||| ||| | | | |||||| | |||| | | Sbjct 1784712 TCATCGACAGAAACTACTACCCAGTTCCAGAAGCCGAG-AGATCTAACAAGAGAAATAGA 1784654 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 105279 ||||||| | ||||| || ||| | || || ||||| | ||| || |||| Sbjct 1784653 CCAATTGCCTTGGGTGTACAAGGTTTGGCCGACACTTTCATGGCATTGAGATTAC-CATT 1784595 Query 105280 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGC 105339 || || | ||||| | ||| | || | || || |||||||| || |||| || Sbjct 1784594 CGACTCTCAAGAAGCTAGAGAATTGAACATCCAAATCTTCGAGACCATCTACCACGGTGC 1784535 Query 105340 TCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 | || || | |||||||| | || ||||| |||||| | | |||||||| Sbjct 1784534 CGTCGAAGCCTCTATTGAGTTGGCTTCCGAAGAAGGTCCTTATGAATCTTACGAGGGTTC 1784475 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA 105459 ||||| || ||||| || | |||||||| ||||||| | || |||| || || Sbjct 1784474 CCCAGCATCTCAAGGTTTGTTACAATTTGACTTGTGGGAGAGAAAG-CCAA-CTGAGTTA 1784417 Query 105460 CG--ACTGGGAAGCTCTCAAG--GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 | ||||||| || | ||| ||| | | || | ||| | | ||| | Sbjct 1784416 TGGGACTGGGATGCATTGAAGCAGAAGTTGGCCA--AGCACGGTTTGAGAAACTCCTTGT 1784359 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 | | |||||||||||||| || || || | ||||| |||||||| || ||||| || | Sbjct 1784358 TAGTTGCTCCAATGCCAACCGCTTCTACTTCTCAAATATTGGGTAACAACGAATGTTTCG 1784299 Query 105576 AACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTC 105634 | || || || | |||||||| ||| |||||| | || ||||| || || ||| Sbjct 1784298 AGCCATATACTTCTAACATCTACTCT-AGAAGAGTGTTAGCAGGAGAATTCCAAATCGTC 1784240 Query 105635 AACAAGCAT-CTCGTGGA-TGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGG 105692 ||| ||| || || | ||| | || | ||| ||||| | | | |||||| Sbjct 1784239 AACC--CATACTTGTTGCGTGATTTGGTCGATTTGGGTATCTGGAACGATGCCATGAAGA 1784182 Query 105693 ATCTCATGGTG----AAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAA 105748 | ||| | | | ||| ||| || || | | | | |||||| |||| Sbjct 1784181 ACAACATCATTTCTAACAACGG----TTCTATCCAGACATTGGCTAACATTCCAGATGAG 1784126 Query 105749 ATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCC 105808 | ||| || ||| || |||||||||||| ||| || ||||||| ||||| Sbjct 1784125 CTCAAGGCCTTATACAAGACTGTTTGGGAAATCTCACAAAAGCATATCATTGATATGGCT 1784066 Query 105809 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTA--TGAA---TCTCTTCATGGAAA 105863 || || | | | ||||||||||||| ||| ||| |||| || | ||| ||| Sbjct 1784065 GCTGACAGAGCTGCCTTCATTGATCAA--TCACAGTCGTTGAACATTCACATCAAGGAC- 1784009 Query 105864 GTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAA 105923 ||||| ||| ||||| | |||||||| | ||| |||||||||||||| | || | Sbjct 1784008 --CCAACAATGGGTAAGCTTACCTCTATGCATTTCTACGGTTGGAAGAAGGGTTTGAAGA 1783951 Query 105924 CGGGGATGTATTAC 105937 | || ||||| ||| Sbjct 1783950 CTGGTATGTACTAC 1783937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260661475560