Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3 147 2e-30 >seq3 Length=2118207 Score = 147 bits (162), Expect = 2e-30 Identities = 506/779 (65%), Gaps = 10/779 (1%) Strand=Plus/Plus Query 79098 CTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCT 79157 ||||| ||| || ||||| ||||| ||||| || | || | ||||||||||||| | Sbjct 1784858 CTCGACGATCTCACAACACAAGTTAGAAGACTTAATTATACCCAAGTTCTTCTGGTTGGT 1784917 Query 79158 CTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTT 79217 ||||| ||||||||| |||||||| ||||| | || || ||||| ||| |||| || Sbjct 1784918 CTTCTTGTTACAGGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCCTC 1784977 Query 79218 GAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTAC--CGACCCTGTGCG 79275 | | | ||| ||| | | | ||| ||| | ||| ||| | || | | Sbjct 1784978 CAAGATGGCGTACCACAACTTTTGAGCCTTGAC--GGTGCTTCTACCTCTTCCTTCTCTC 1785035 Query 79276 ACGT-ACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCA 79334 ||| |||| | ||| ||||| | ||| | || || || || || |||| ||| || Sbjct 1785036 TCGTAACGTTC-GTATAACTCTTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGC 1785094 Query 79335 CTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTC 79394 |||| || | | || ||| || | | || || || ||| |||||| | || Sbjct 1785095 TTCGTTTGGAGAGAAAAGAGTCCATTCACCATTCTGTTCCACTCTCTTCATGAACAAATC 1785154 Query 79395 CGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAG 79454 || ||||||| || | ||| | || | | || || || | || || ||| Sbjct 1785155 TGGAATCCACAAAGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTCTT 1785214 Query 79455 ACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGA 79514 | | || | ||||| | |||||| |||||||| ||||||| || | ||| || | Sbjct 1785215 TCTGATGTCAATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAGC 1785274 Query 79515 ACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAG 79574 ||| |||||| || || |||| ||||| | || ||||||||||| || || | Sbjct 1785275 ACCTGGACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAAC 1785334 Query 79575 CATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCG 79634 ||| || | || |||| || | ||||| || || || | ||| | | || Sbjct 1785335 CATTGGAATAATACCGTTGGAGGTACCGTTAGTACCAGCAATGTAAGCACCAGTAGAACG 1785394 Query 79635 AATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCT 79693 ||||| | | | ||| | || || || || | | |||||| || || || || Sbjct 1785395 GATGTT-GTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCT 1785453 Query 79694 TGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCG 79753 | | || ||||| || || || || |||||||||||||| ||||| ||||| || | Sbjct 1785454 TCAAGGTGTCGTAAATACCATCAATAGAGTCGTCCTTCATTGCGACAAGGAAACAAGAAG 1785513 Query 79754 ACATCTGTGG-GTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAAC 79812 |||| ||||| | || ||||| |||||||| | || || | |||| |||||||| Sbjct 1785514 ACATTTGTGGAGATG-GGGTACCAGCGTTGAACAAAGTAGGAGAACCGTGGGTGAAGAAA 1785572 Query 79813 TTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCC 79871 ||| ||||| | ||| | || |||| | || |||||| ||||| || || Sbjct 1785573 CGTTGAGACATCAAGTTGTAAGATTCGATGACCTTCTCGATGTCGTCACCGTGAATACC 1785631 Score = 138 bits (152), Expect = 1e-27 Identities = 542/839 (65%), Gaps = 14/839 (2%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||| |||| | | || || || || |||||| || | ||| ||| | ||| Sbjct 1785648 TCATGAGAGTTTCCATTGGTATTCACGGTGACGACATCGAGAAGGTCATCGAATCTTACA 1785589 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 || ||||| || |||||||| |||| | || || | |||||||| ||||| Sbjct 1785588 ACTTGATGTCTCAACGTTTCTTCACCCACGGTTCTCCTACTTTGTTCAACGCTGGTACCC 1785529 Query 19236 ACAAC-CCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294 || | || || ||||| |||||||| || || |||||||| ||| ||||| || Sbjct 1785528 -CATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCAATGAAGGACGACTCTATTGATGGT 1785470 Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354 || ||||| || | ||| || || || |||||| | | || ||||| || | Sbjct 1785469 ATTTACGACACCTTGAAGACCTGTGCCTTGATTTCCAAGAGTGCTGGTGGTATTGGTTTG 1785410 Query 19355 CAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA 19413 ||| | | | || ||||| || | |||| | || ||| || ||||| || | Sbjct 1785409 CACATTCAC-AACATCCGTTCTACTGGTGCTTACATTGCTGGTACTAACGGTACCTCCAA 1785351 Query 19414 CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGG 19473 |||||| | |||||| | || |||||||||||||| || || ||||| |||| || || Sbjct 1785350 CGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTGCTAGATACGTTGACCAAGGTGG 1785291 Query 19474 CGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATG 19531 ||| || || | ||| || ||| | ||| | |||||||||||||| ||| || | Sbjct 1785290 TAACAAGCGTCCAGGTGCT--TTTGCCTTGTACTTGGAGCCATGGCACGCAGACATCTTC 1785233 Query 19532 GATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC 19591 || ||| | || | | ||| || ||| | || || || | | | || | ||| Sbjct 1785232 GACTTCATTGACATCAGAAAGAATCACGGTAAGGAAGAAATCAGAGCTAGAGATTTGTTC 1785173 Query 19592 ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCAC 19651 | || ||||||||||| || | |||||| ||| || || || | | |||||| Sbjct 1785172 CCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGAGTGGAACAGAATGGTGAATGGACT 1785113 Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAG 19711 || | | || ||||| || ||| | || || || ||||| || | ||| | ||| Sbjct 1785112 CTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTTTACGGTGACGAATTCGAAGAG 1785053 Query 19712 TTGTACCGGAC-TTACG-TAGCCCAGGGCCGGTTCAAGAAG-GTGGTCCGGGCCCGGGAC 19768 || || || || ||||| || ||| | | ||||| ||| ||| | | Sbjct 1785052 TTATA-CGAACGTTACGAGAGAGAAGGAAGAGGT--AGAAGCACCGTCAAGGCTCAAAAG 1784996 Query 19769 GTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAG 19828 | ||| || | || | | ||| || ||||| || || | ||||| |||||| Sbjct 1784995 TTGTGGTACGCCATCTTGGAGGCTCAGACTGAAACCGGTACTCCTTTCATGTTGTACAAG 1784936 Query 19829 GACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTG 19888 || ||| ||| ||| | || ||||||||| | || || ||||| || ||| || Sbjct 1784935 GATGCCTGTAACAAGAAGACCAACCAGAAGAACTTGGGTATAATTAAGTCTTCTAACTTG 1784876 Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947 ||| ||| ||| | ||| ||| || || || ||| || |||||| |||| || Sbjct 1784875 TGTTGTGAGATCGTCGAGTACTCCTCTCCAGAGGAAGTTGCTGTCTGTAATTTGGCCTC 1784817 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 |||| || |||||||| || ||||| | |||||||||||| ||||| | |||||| Sbjct 1783929 GTTCTTAAGTAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAG 1783988 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | ||||| ||| | |||| || ||| ||||| | |||||| || || || ||| Sbjct 1783989 GTAAGCTTACCCATTGTTGGGTCCTTGATGTGAATGTTCAACGACTGTGATTGATCAATG 1784048 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 | ||| | | ||| || ||||| || |||| |||||| | || ||||| | ||| Sbjct 1784049 AAGGCAGCTCTGTCAGCAGCCATATCAATGATATGCTTTTGTGAGATTTCCCAAACAGTC 1784108 Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGA 78397 ||| | |||||| ||||| | ||||| Sbjct 1784109 TTGTATAAGGCCTTGAGCTCAT-CTGGA 1784135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524669725360