Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 >seq1 Length=3149860 Score = 113 bits (124), Expect = 4e-20 Identities = 210/306 (69%), Gaps = 2/306 (1%) Strand=Plus/Plus Query 30059 CTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 |||||||| ||||| || | | |||| || || || | |||||| ||| |||||| Sbjct 1358649 CTCACGTAGAACTGGCAGAAGACGTGACATGGTGGCAAAGCCATCTTGCCAAAGTCTGGT 1358708 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178 || ||||| ||| ||| ||| || | ||||| | ||| || || | | | | | Sbjct 1358709 GGATTCCAAGCGGACATGATAATTCTTCTGTCGTATGGATTCGTCTTTAACTTCTTGATG 1358768 Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTC 30237 | | ||||| ||| || | || || | |||||||| ||| ||| |||| || Sbjct 1358769 ACATCTTGCAACTGGTCAAATCCTTGACCGGTGTAGTCTGTG-TCACAATCCTTGTATTC 1358827 Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297 ||||||||||| ||||| ||||| ||||| || ||||||| || || ||| | || Sbjct 1358828 AGCTCCGAAATGTCTCCATTGGAATCCGTAAACTGGTCCCAAATCACCTTCTCTACGGTC 1358887 Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357 || ||| ||||||||| || || | || ||||| | |||||||||||||| || Sbjct 1358888 AGTCAAACCCAACTTGTCCAAGAACTCACGAGATCCGTTTCCTTCCCAGATCTTTACGCC 1358947 Query 30358 CTTCTC 30363 || || Sbjct 1358948 TTTTTC 1358953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310305913748