Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq9 125 4e-24 >seq9 Length=507287 Score = 125 bits (138), Expect = 4e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || ||||| || |||||| |||||||| ||||| || || ||||| |||| ||||| Sbjct 282821 AAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCT 282880 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||| ||||| || || ||||||||||||||||| || || | || ||||||||| Sbjct 282881 TCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCT 282940 Query 34615 GTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 |||| || | || ||| | ||| || || ||| ||||||| ||| || || Sbjct 282941 TGGATC-TTGGACTTGACGTTGTCAATGGTATCGGAAGACTCAACTTCCAAGGTAATGGT 282999 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||||||| || || || || || ||||| Sbjct 283000 CTTACCGGTTAATGTCTTAACGAAGATTTGCAT 283032 Score = 100 bits (110), Expect = 2e-16 Identities = 155/228 (68%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| || || || |||||| |||||||| ||||| || || ||| Sbjct 282350 CCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 282409 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| ||||||| | ||| ||||| || || || || | ||||| || || || Sbjct 282410 AGAGTTCTACCGTCTTCYAATTGCTTACCRGCGAARATYAAWCKYTGTTGRTCTGGAGGA 282469 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| |||| || | || ||| | ||| || || || || Sbjct 282470 ATACCTTCCTTGTCTTGGATC-TTGGACTTRACGTTGTCAATRGTRTCRGAAGAYTCAAC 282528 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || ||||| || || || || || || || ||||| Sbjct 282529 YTCMARRGTAATGGTCTTACCRGTYAAWGTCTTRACGAAGATTTGCAT 282576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729527120427