Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq9 136 3e-27 >seq9 Length=507287 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| |||| ||||||||||| || |||| Sbjct 282804 ATGCAAATCTTCGTTAAGACTTTGACTGGTAAGACTATCACTCTTGAAGTCGAGTCGTCT 282745 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || |||||||| ||||| || || || || ||| Sbjct 282744 GACACCATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 282685 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | |||||| || ||||| |||||| || || |||| || |||||| Sbjct 282684 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAAC 282625 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || || |||||| | ||| | ||||| || Sbjct 282624 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTGAGATTGAGAGGTGGTAT 282575 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || | ||||| ||| | ||||| | ||||| || | ||| Sbjct 283032 ATGCAAATCTTCGTTAAGACATTAACCGGTAAGACCATTACCTTGGAAGTTGAGTCTTCC 282973 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || || |||||||| ||||| || || || || ||| Sbjct 282972 GATACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 282913 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||||||||| | ||| || || |||||||||||| || || |||| || |||||| Sbjct 282912 CAGCGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 282853 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || |||||||| | ||| | ||||| || Sbjct 282852 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGTAT 282803 Score = 132 bits (146), Expect = 4e-26 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| | ||||||||||| || ||| | || Sbjct 282348 ATGCAAATCTTCGTYAAGACTTTGACTGGTAAGACCATTACTCTTGARGTTGAATCTTCT 282289 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || |||||||| ||||| || || || || ||| Sbjct 282288 GACACYATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGAYCAA 282229 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | |||||| || ||||| |||||| || || |||| || |||||| Sbjct 282228 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAAC 282169 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || || ||||| | ||| | ||||| || Sbjct 282168 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTRAGATTGAGAGGTGGTAT 282119 Score = 127 bits (140), Expect = 2e-24 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || | || || ||| | ||||| | || || || | || Sbjct 282576 ATGCAAATCTTCGTYAAGACWTTRACYGGTAAGACCATTACYYTKGARGTTGARTCTTCY 282517 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || || |||||||| ||||| || || || || ||| Sbjct 282516 GAYACYATTGACAACGTYAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGAYCAA 282457 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||| || || ||||| |||||| || || |||| || |||||| Sbjct 282456 CARMGWTTRATYTTCGCYGGTAAGCAATTRGAAGACGGTAGAACTCTTTCTGACTACAAC 282397 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || || |||||| | ||| | ||||| || Sbjct 282396 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTGAGATTGAGAGGTGGTAT 282347 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| | ||||||||||| || ||| | || Sbjct 282120 ATGCAAATCTTCGTTAAGACTTTGACTGGTAAGACCATTACTCTTGAGGTTGAATCTTCT 282061 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || |||||||| ||||| || || || || ||| Sbjct 282060 GACACCATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 282001 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | |||||| || ||||| |||||| || || |||| || |||||| Sbjct 282000 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAAC 281941 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| || || | || || ||||| | ||| | ||||| Sbjct 281940 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTAAGATTGAGAGGTGG 281894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918296706880