Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=3149860 Score = 87.8 bits (96), Expect = 2e-12 Identities = 199/297 (67%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 |||||||| ||||||| | ||| || || || | |||||| | || || Sbjct 1358652 ACGTAGAACTGGCAGAAGACGTGACATGGTGGCAAAGCCATCTTGCCAAAGTCTGGTGGA 1358711 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 ||||| ||| |||| | || |||||||| | || ||| ||| || | | ||| || Sbjct 1358712 TTCCAAGCGGACATGATAATTCTTCTGTCGTATGGATTCGTCTTTAACTTCTTGATGACA 1358771 Query 6848 TACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCC 6907 | |||| |||||| ||| || || | ||||| | || | || || || || Sbjct 1358772 TCTTGCAACTGGTCAAATCCTTGACCGGTGTAGTCTGTGTCACAATCCTTGTATTCAGCT 1358831 Query 6908 CCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTC-CTCCCGAGATGG 6966 || || |||||||| ||||| ||||| || || ||||| || || || || | | | | Sbjct 1358832 CCGAAATGTCTCCATTGGAATCCGTAAACTGGTCCCAAATCACCTTCTCTACGGTCA-GT 1358890 Query 6967 GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023 || ||| |||||||| || || ||||| |||| | ||||||||||| || || Sbjct 1358891 CAAACCCAACTTGTCCAAGAACTCACGAGATCCGTTTCCTTCCCAGATCTTTACGCC 1358947 Score = 87.8 bits (96), Expect = 2e-12 Identities = 199/297 (67%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 || || ||||||||||| | |||| ||||| || || |||||||| ||| || | Sbjct 1358947 GGCGTAAAGATCTGGGAAGGAAACGGATCTCGTGAGTTCTTGGACAAGTTGGGTTTGAC- 1358889 Query 34382 TCTCGGGAG-GAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 | | | || || || || ||||| || || ||||| ||||| |||||||| || || || Sbjct 1358888 TGACCGTAGAGAAGGTGATTTGGGACCAGTTTACGGATTCCAATGGAGACATTTCGGAGC 1358829 Query 34441 GGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGT 34500 || || || | || | ||||| | || || ||| |||||| |||| | || Sbjct 1358828 TGAATACAAGGATTGTGACACAGACTACACCGGTCAAGGATTTGACCAGTTGCAAGATGT 1358769 Query 34501 GATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560 ||| | | || ||| ||| || | |||||||| || | |||| ||| ||||| || Sbjct 1358768 CATCAAGAAGTTAAAGACGAATCCATACGACAGAAGAATTATCATGTCCGCTTGGAATCC 1358709 Query 34561 GAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617 || | |||||| | || || || ||| | ||||||| |||||||| Sbjct 1358708 ACCAGACTTTGGCAAGATGGCTTTGCCACCATGTCACGTCTTCTGCCAGTTCTACGT 1358652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262293537680