Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq9 165 2e-35
seq3 156 1e-32
>seq9
Length=507287
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | |||||||||||| || ||||||||||| || || | ||| || || ||
Sbjct 281905 TCTTAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACC 281964
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| | ||||| || ||||| || | | ||||||||| ||||||| ||||||||
Sbjct 281965 GTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 282024
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| || ||||||||||| ||||||||| ||||| ||
Sbjct 282025 GTCTTGGATCTTGGACTTAACGTTGTCAATGGTGTCAGAAGATTCAACCTCAAGAGTAAT 282084
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 282085 GGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282120
Score = 154 bits (170), Expect = 3e-32
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | || | |||||||||||| || ||||||||||| || || | ||| || || ||
Sbjct 282133 TCTYAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACC 282192
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| | ||||| || ||||| || | | |||||| || ||||||| ||||||||
Sbjct 282193 GTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGRTCTGGAGGAATACCTTCCTT 282252
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| || || |||||||| |||||| || ||||| ||
Sbjct 282253 GTCTTGGATCTTGGACTTAACGTTGTCAATRGTGTCAGAAGATTCAACYTCAAGAGTAAT 282312
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 282313 GGTCTTACCAGTCAAAGTCTTRACGAAGATTTGCAT 282348
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||||||||| || ||||||||||| || || | ||| || || || ||||| | ||
Sbjct 282601 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCTAATTG 282660
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || ||||| || | | ||||||||| ||||||| ||||||||||| ||||||||
Sbjct 282661 CTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTT 282720
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || ||||||||||| || || || |||||||| ||||| || ||
Sbjct 282721 GGACTTAACGTTGTCAATGGTGTCAGACGACTCGACTTCAAGAGTGATAGTCTTACCAGT 282780
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| || || | |||||
Sbjct 282781 CAAAGTCTTAACGAAGATTTGCAT 282804
Score = 147 bits (162), Expect = 5e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | |||||||||||| || ||||||||||| || || | ||| || || ||
Sbjct 282817 TCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACC 282876
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || |||||||| | || |||||||| ||||||| ||||||||
Sbjct 282877 GTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCTGGAGGAATACCTTCCTT 282936
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| || ||||| || || ||||| || | || ||
Sbjct 282937 GTCTTGGATCTTGGACTTGACGTTGTCAATGGTATCGGAAGACTCAACTTCCAAGGTAAT 282996
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTAT 211119
||||| || || | ||||| || || | |||||| |||
Sbjct 282997 GGTCTTACCGGTTAATGTCTTAACGAAGATTTGCATTGTAT 283037
Score = 140 bits (154), Expect = 8e-28
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||||||||| || ||||||||||| || || | ||| || || || ||||| | ||
Sbjct 282373 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCYAATTG 282432
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || ||||| || | | ||||| || ||||||| ||||||||||| ||||||||
Sbjct 282433 CTTACCRGCGAARATYAAWCKYTGTTGRTCTGGAGGAATACCTTCCTTGTCTTGGATCTT 282492
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || || || || || ||||| || | || || ||||| || ||
Sbjct 282493 GGACTTRACGTTGTCAATRGTRTCRGAAGAYTCAACYTCMARRGTAATGGTCTTACCRGT 282552
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| ||||| || || | |||||
Sbjct 282553 YAAWGTCTTRACGAAGATTTGCAT 282576
>seq3
Length=2118207
Score = 156 bits (172), Expect = 1e-32
Identities = 166/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| ||| | ||| | |||||||| || |||||||| || || | |||||| || ||
Sbjct 53431 TCTTAAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACC 53372
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| |||||| || |||||||| | | |||||||||||| |||| ||||||||
Sbjct 53371 GTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 53312
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||||||||| || || || || |||||||| ||| || || || | || ||
Sbjct 53311 GTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAAT 53252
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||||||
Sbjct 53251 GGTCTTACCTGTTAAAGTCTTGACGAAAATTTGCATTTT 53213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151717818935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |