Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3 235 5e-57 >seq3 Length=2118207 Score = 235 bits (260), Expect = 5e-57 Identities = 572/856 (67%), Gaps = 19/856 (2%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| || |||| ||| |||||||| ||||| || || | || Sbjct 1740513 ACACCAGCCTTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAG 1740572 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTG-CGTTGTAA-TGTTTTTCACACTTTA 4365 || || |||||||| || || || || || |||| |||||||| | || || || | Sbjct 1740573 GAGATGTTTTCCATGAAGTCGAATGGGTT-GTTGACGTTGTAAATCTTCTTGTTACCCAA 1740631 Query 4366 GAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425 ||| | | |||| ||| || || ||||| | || |||| ||| | ||| ||| | Sbjct 1740632 -AGCAATCAATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAGCGTTCA 1740690 Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 | || | || || || | |||| || || || ||||| || || | || || | Sbjct 1740691 TACCCAACAAGGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTGACAGCCT 1740750 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATA 4545 | ||||| || | | | || || |||| | ||| |||| || || | Sbjct 1740751 CAGTGATGATCTTCTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACA 1740810 Query 4546 AACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTA 4605 |||| || || ||| ||| |||||||| ||||||| |||| || || || || || | Sbjct 1740811 AACAGGCGAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAGAAAGTCA 1740870 Query 4606 ATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGA 4665 | || ||||| ||||||||||| || | ||| || |||| ||||| || ||| |||| Sbjct 1740871 AACCTGGCATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCACTGAAGA 1740930 Query 4666 ATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTT 4725 | || || || ||||| ||||| || ||||||| |||||| | ||| | ||| | Sbjct 1740931 AAATACCCTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAA---GGCCTCGTCGT 1740987 Query 4726 TA---ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 | |||||| | || ||||||| ||| || || | | ||| ||||| ||| |||| Sbjct 1740988 CAGAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATAG 1741047 Query 4783 CGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 | || || || | | || | | ||||| | || |||||||| |||| | Sbjct 1741048 CATTGAAAAGGAAGTCAGCTTCCTTA---GGGTCCTTAACGTAAGTGTCAATTAACAAAG 1741104 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 || | || || || || ||||| || ||| || || ||||| || || | |||| Sbjct 1741105 AGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTT 1741164 Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959 ||| | ||| || ||| | | || | || || ||||| ||||| || ||||||||| Sbjct 1741165 CTGGAATTTGGACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCAG 1741224 Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG-TCAGGCTTAAGTTTT 5018 ||| || || || ||||| | | | || || ||||| |||| || | | || |||| Sbjct 1741225 AGGCAGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTTT 1741284 Query 5019 --TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076 ||||||| | ||| ||| | || |||| |||||| | ||||| || || |||| Sbjct 1741285 GGTTCCAGTCAGTGGTATCCTTACTCAAGTCAATTTCTTCGGCGGTCCAGAAGGAGGCTT 1741344 Query 5077 CCGCTTTTTTGTACAT 5092 | || || |||||||| Sbjct 1741345 CGGCCTTCTTGTACAT 1741360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049501111327