Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3 120 3e-22 >seq3 Length=2118207 Score = 120 bits (132), Expect = 3e-22 Identities = 295/445 (66%), Gaps = 7/445 (2%) Strand=Plus/Plus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 || || ||||| || || ||| ||||| |||||||| || | ||||| ||||| || Sbjct 1740804 AATAACAAACAGGCGAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAG 1740863 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || || |||||||| || |||| || || | ||| || || | |||||| || || Sbjct 1740864 AAAGTCAAACCTGGCATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCA 1740923 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 ||||||||||||||||| || ||||| || || | | | ||| || || | Sbjct 1740924 CTGAAGAAAATACCCTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCG 1740983 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 | ||||| |||||| | | ||| | ||||||| | | | || ||| | ||| Sbjct 1740984 TCGTCAGAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATGCATGGAATGTTGTCA 1741043 Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTA---TCTGTTATATATGTATCAATTAGT 23796 || || || || || || | |||| ||| || | | || || ||||||| Sbjct 1741044 ATAGCATTGAAAAGGAA---GTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAAC 1741100 Query 23797 AAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTA 23856 ||| || | || || ||||| ||||| || ||| || || || || ||||| | Sbjct 1741101 AAAGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTG 1741160 Query 23857 GCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916 ||||| | | ||| || || | | || | | | || || ||||| |||||||| Sbjct 1741161 GCTTCTGGAATTTGGACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCG 1741220 Query 23917 TCACTAGCAGCAAAGAAAG-CAAGA 23940 ||| ||||| ||||||| ||||| Sbjct 1741221 TCAGAGGCAGCGAAGAAAGCCAAGA 1741245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487876146600