Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq9 136 3e-27
seq3 122 6e-23
>seq9
Length=507287
Score = 136 bits (150), Expect = 3e-27
Identities = 173/236 (73%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||| || |||| |||||| ||| |||||||||||||||||
Sbjct 282799 TTGCATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 282858
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|| | ||||| | |||| |||| ||||| || || ||||| |||||||| ||
Sbjct 282859 GTCAGAAAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGG 282916
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|||| ||| | ||||||||| || ||||| ||| | | | ||||| ||||
Sbjct 282917 TCTGGAGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTATCGGAA 282976
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || |||| ||||| ||||| || || | ||||| ||||||||||||||
Sbjct 282977 GACTCAACTTCCAAGGTAATGGTCTTACCGGTTAATGTCTTAACGAAGATTTGCAT 283032
Score = 127 bits (140), Expect = 1e-24
Identities = 167/237 (70%), Gaps = 6/237 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| |||||| || | |||||| ||| |||||||||||||||||
Sbjct 282343 TTGCATACCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 282402
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|| | ||||| | |||| || | ||||| || || || || || | || ||
Sbjct 282403 GTCAGAAAGAGTT--CTACCGTCTTCYAATTGCTTACCRGCGAARATYAAWCKYTGTTGR 282460
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280
|||| ||| | ||||||||| || ||||| ||| | ||| | || || || |
Sbjct 282461 TCTGGAGGAATACCTTCCTTGTCTTGGATCTTGGACTT-RACGTTGTCAATRGTRTCRGA 282519
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || || | ||||| ||||| || || | ||||| ||||||||||||||
Sbjct 282520 AGAYTCAACYTCMARRGTAATGGTCTTACCRGTYAAWGTCTTRACGAAGATTTGCAT 282576
Score = 125 bits (138), Expect = 5e-24
Identities = 171/237 (72%), Gaps = 6/237 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||| || || | |||||| ||| |||||||||||||||||
Sbjct 282115 TTGCATACCACCTCTCAATCTYAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 282174
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|| | ||||| | |||| || | ||||| ||||| || ||||| | || ||
Sbjct 282175 GTCAGAAAGAGTT--CTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGR 282232
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280
|||| ||| | ||||||||| || ||||| ||| || ||| | || ||||| |
Sbjct 282233 TCTGGAGGAATACCTTCCTTGTCTTGGATCTTGGACTT-AACGTTGTCAATRGTGTCAGA 282291
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || || | ||||| ||||| || || | ||||| ||||||||||||||
Sbjct 282292 AGATTCAACYTCAAGAGTAATGGTCTTACCAGTCAAAGTCTTRACGAAGATTTGCAT 282348
Score = 123 bits (136), Expect = 2e-23
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168
|| ||||||| ||| || || | |||||| ||| ||||||||||||||||| || |
Sbjct 281894 CCACCTCTCAATCTTAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 281953
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||||| | |||| || | ||||| ||||| || ||||| | || || |||| ||
Sbjct 281954 AGAGTT--CTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAG 282011
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287
| | ||||||||| || ||||| ||| || ||| | |||||||| | |||||
Sbjct 282012 GAATACCTTCCTTGTCTTGGATCTTGGACTT-AACGTTGTCAATGGTGTCAGAAGATTCA 282070
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | ||||| ||||| || || | ||||| ||||||||||||||
Sbjct 282071 ACCTCAAGAGTAATGGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282120
Score = 118 bits (130), Expect = 8e-22
Identities = 171/237 (72%), Gaps = 6/237 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| |||||| || | |||||| ||| |||||||||||||||||
Sbjct 282571 TTGCATACCACCTCTCAATCTCAAAACTAAGTGAAGAGTGGATTCCTTTTGGATGTTGTA 282630
Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|| | ||||| | |||| || | ||||| ||||| || ||||| | || ||
Sbjct 282631 GTCAGAAAGAGTT--CTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGG 282688
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280
|||| ||| | ||||||||| || ||||| ||| || ||| | |||||||| |
Sbjct 282689 TCTGGAGGAATACCTTCCTTGTCTTGGATCTTGGACTT-AACGTTGTCAATGGTGTCAGA 282747
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || || | || || ||||| || || | ||||| ||||||||||||||
Sbjct 282748 CGACTCGACTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTAACGAAGATTTGCAT 282804
>seq3
Length=2118207
Score = 122 bits (134), Expect = 6e-23
Identities = 168/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| ||| || |||| ||| | ||| |||||| ||||||||||| || |
Sbjct 53442 CCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 53383
Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
|| || || |||| |||| |||||| || || |||||||| | || || || | |
Sbjct 53382 AG--GGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTG 53325
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| ||| ||||| ||| || ||| | |||||||||| ||| ||
Sbjct 53324 GAATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGT--CAATGGTGTCGGAGGACTC 53267
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 53266 GACTTCCAAGGTAATGGTCTTACCTGTTAAAGTCTTGACGAAAATTTGCAT 53216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990316639723
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