Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 114 3e-20 seq6 91.5 3e-13 >seq2 Length=3116340 Score = 114 bits (126), Expect = 3e-20 Identities = 181/254 (71%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 |||||||| ||||| || | | ||| | || ||| | ||| ||| | ||| || | Sbjct 2726387 ATCATTACTGAAGCTGTCAAGATCGAGCAAGAATTCTTCACTGATGCTTTGCCA-GTTTC 2726329 Query 230446 CTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 |||||| || |||||||| ||| | ||| | || ||| |||| ||||| |||||| | || Sbjct 2726328 CTTATTAGGAATGAACGCCGAATTGATGTGTCAATACGTCGAGTTCGTTGCCGACAG-AT 2726270 Query 230505 TTTTG-TTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGG 230563 | ||| |||| | || || |||| || |||||| | ||||| || | || |||| Sbjct 2726269 TATTGATTGCTTTGGGCAACAAGAAGGTCTACAACGTCACCAACCCATTCGACTTCATGG 2726210 Query 230564 AGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 || ||| || | || ||||| ||||||||||| ||| | ||||||||||| || | Sbjct 2726209 AGAACATCTCCTTAGCTGGTAAGACTAACTTCTTCGAGAAGAGAGTCAGTGACTACCAAA 2726150 Query 230624 GGCCTGGTGTGATG 230637 | | ||||| ||| Sbjct 2726149 AGGCCGGTGTCATG 2726136 >seq6 Length=1682205 Score = 91.5 bits (100), Expect = 3e-13 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 281484 CCCTTGTACCACGGTTTCATTTCGACGAGGTCCTCTCCAGATATCAAACGCTTCACGTTG 281543 ||||| ||||| || ||||||| | | | || ||| ||||| | | | |||| Sbjct 233721 CCCTTATACCATGGAATCATTTCCTCCATGGGTTCACCATTCATCAATCTTCTAATGTTG 233662 Query 281544 TCTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCGGTTCCAATACCA 281603 || || | || | ||||| |||| |||||||| ||||||||||| |||||||| || Sbjct 233661 TCAACCAAATCCATAGGATTGAAACTTGGAATGTTGGTAGACCAACCAGTTCCAATTCCT 233602 Query 281604 CTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAACATTCTGGTTCAA 281658 || |||||| ||||| | | || |||| ||| | || ||||||||||||| Sbjct 233601 TCTGTACCATTCACCAATAACATAGGTATAACAGGCAAGTACCATTCTGGTTCAA 233547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823864466300