Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2 147 2e-30 >seq2 Length=3116340 Score = 147 bits (162), Expect = 2e-30 Identities = 490/753 (65%), Gaps = 12/753 (2%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 ||||||| || || || | || ||||| |||||||| || || ||| || || |||| Sbjct 2726150 TTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTCT 2726209 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 ||||||| || || || || || | || | | || | | | |||| | | Sbjct 2726210 CCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTG--TTGCCCAAAGCAATCAA 2726267 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCT-ATAA 16850 |||||| || || || || || | ||||| ||||| |||||| |||||||||| |||| Sbjct 2726268 TAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAATAA 2726327 Query 16851 GACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910 | || || | ||| || || || ||| |||||| || || ||||| |||| | Sbjct 2726328 G-GAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAATGA 2726386 Query 16911 TACTAGCAACTCGTTCCTCGGACGGTGTATGTTT---AAGATGTTTAAACATCAGACATG 16967 | | |||| | || || | | || ||||| ||| || |||| || ||| | Sbjct 2726387 TCTTCTCAAC-AATAACTGGGTCTG-GTCTGTTTTGCAAG-TGAGAGAACAACAAACAGG 2726443 Query 16968 CGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGG 17027 |||| ||| ||||| || |||||||| | ||| | |||||| || || ||||| || | Sbjct 2726444 CGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTG 2726503 Query 17028 GCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATAC 17087 |||| |||| ||||| ||||| || || | ||||| || ||| || || |||| Sbjct 2726504 GCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATAC 2726563 Query 17088 CCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCC 17147 |||| || | || || || | ||||| || || || || || | || | |||| Sbjct 2726564 CCTCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAGATCC 2726623 Query 17148 ATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207 || || |||| || || || | | || || || | || ||||| || || | Sbjct 2726624 ATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTTGAAAA 2726683 Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267 || ||||| |||| | | || || || || | || ||| | || | Sbjct 2726684 GGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTATGTCTCAG 2726743 Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327 |||| ||||| ||||| || || || ||||| || || |||||| | ||||| | Sbjct 2726744 AGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGGA 2726803 Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387 |||| | |||| || | | || ||||| || || || || |||||||| | Sbjct 2726804 CTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCGAAGA 2726863 Query 17388 ACGCCAATATATGCTTAATGAAATATTTTTCGT 17420 | ||||| ||| | |||||| ||| |||||| Sbjct 2726864 AAGCCAAGATACGGGAAATGAAGTATCTTTCGT 2726896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545535306800