Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2 165 8e-36 >seq2 Length=3116340 Score = 165 bits (182), Expect = 8e-36 Identities = 491/753 (65%), Gaps = 12/753 (2%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||| ||||| || | || |||||||||||||| || || |||| || || || | Sbjct 2726150 TTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTCT 2726209 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 |||| || || || || || || | | | ||| || |||| | | | || Sbjct 2726210 CCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAAAGCAATCAATA 2726269 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTA-TAAGT 16090 |||| || || || || || | ||||||||||| || ||| || ||||||| |||| Sbjct 2726270 ATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAATAAGG 2726329 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 || || | ||| | || || |||| ||| || ||| || ||||| ||||||| Sbjct 2726330 AA-ACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAATGATC 2726388 Query 16151 TCGGTGGCTCGTGTTTCAGACGGT---GTATGGTTT--AGGTGTTTAAACATTAGACACG 16205 | ||| | | ||| || || ||| | ||| |||| | ||| | Sbjct 2726389 TT-----CTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACAAACAGG 2726443 Query 16206 CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTG 16265 |||||||| |||| ||||||||||| | ||| | ||||||||| ||||| || |||| Sbjct 2726444 CGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTG 2726503 Query 16266 GCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATAC 16325 ||||| |||| ||||| |||||||| || | ||| || || || || || |||| Sbjct 2726504 GCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATAC 2726563 Query 16326 CCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCC 16385 ||||||||| || ||||| | ||||| || || || || || | | | |||| Sbjct 2726564 CCTCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAGATCC 2726623 Query 16386 ATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445 || || |||| || || || | | | ||||| || | || ||||| || || | Sbjct 2726624 ATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTTGAAAA 2726683 Query 16446 ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTG 16505 || ||||| | || | | || || ||||| | |||| ||| | || | Sbjct 2726684 GGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTATGTCTCAG 2726743 Query 16506 AGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTA 16565 |||| ||||| || || || || || || ||||| || || || | ||||| | Sbjct 2726744 AGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGGA 2726803 Query 16566 CTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAA 16625 |||| | | || || ||| |||||| || || ||||| ||| || || || | Sbjct 2726804 CTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCGAAGA 2726863 Query 16626 ACGCCAATATGTGCTTAATGAAATATTTTTCGT 16658 | ||||| || | |||||| ||| |||||| Sbjct 2726864 AAGCCAAGATACGGGAAATGAAGTATCTTTCGT 2726896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414336073200