Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 >seq3 Length=2759450 Score = 96.9 bits (106), Expect = 3e-15 Identities = 198/289 (69%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 || || ||||| | || ||||| || || ||||| |||| || || || | | Sbjct 1498214 ACGTAGAATTGGCAAAAAACATGGCATGGAGGCAAGGCCATCTTGCCAAAATCAGGAGGG 1498155 Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTA-GGGTTTGTTTTTATAGTATCAATCAA 101985 ||||| || |||| | || |||||||| ||| |||||||| |||| | | || | Sbjct 1498154 TTCCACGCTGACATAATAATTCTTCTATC-GTATGGGTTTGTCTTTAACTTTTTGATGAC 1498096 Query 101986 CTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGC 102045 | | || ||||| | ||||| || ||||||| || | | ||||||||||| Sbjct 1498095 ATCCTGCAACTGGTCGAATCCTTTACCGGTATAATCTGTGTCACAATCCTTATATTCTGC 1498036 Query 102046 TCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT-CTGTCAT 102104 ||||||||||||||| || || ||||| || ||||| | ||| ||||| ||| | |||| Sbjct 1498035 TCCGAAATGCCTCCATTGGAAGCCATAAACTGGTCCCAAATCGCCTTC-TCTACGGTCAG 1497977 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAAT 102153 || || | || || || ||| | |||||| || | ||||| || Sbjct 1497976 TCAATCCCAACTTGTCCAAGAATTCACGAGATCCGTTTCCTTCCCAGAT 1497928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251155972510