Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2 212 7e-50
seq1 111 2e-19
>seq2
Length=3116340
Score = 212 bits (234), Expect = 7e-50
Identities = 594/895 (66%), Gaps = 40/895 (4%)
Strand=Plus/Plus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| |||| || | || ||||| || ||||| ||||| |||| || || ||
Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTAAATCCCAATTCAGAAA 23961
|||||||| ||| |||| ||||| || || |||| ||||| | ||||| || ||
Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTG--CCCAA---AGCAA 2726263
Query 23962 TCAAT---CTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTA 24018
||||| || || || || ||||| | ||| ||||| ||| ||||||||||
Sbjct 2726264 TCAATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTA 2726323
Query 24019 -TAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTT 24077
|||| |||||| | ||| |||| | |||||||| || || ||| || || ||
Sbjct 2726324 ATAAGGA-AACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTA 2726382
Query 24078 ATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT-----AAATGTTTAAACATCA 24132
|| |||||| || | ||| ||| | | || || |||| ||
Sbjct 2726383 AT----GATCTT-CTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACA 2726437
Query 24133 AACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGA 24192
|||| ||||| ||| ||||| ||| |||||||||| || ||||||||||| || || |
Sbjct 2726438 AACAGGCGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCA 2726497
Query 24193 GTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGA 24252
|| ||||||| || | ||| || | ||| || || || || || |||||| || |
Sbjct 2726498 AACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAA 2726557
Query 24253 AAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCT-----GTC 24307
| || || || || || || || || | | ||| || || ||| | ||| |||
Sbjct 2726558 AGATACCCTCAACAGCAGCGAAAGCTACTAATCTCTCACC-GAACAAG-GCTTCATCGTC 2726615
Query 24308 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 24367
| ||||| | ||||| || ||||||||| | | ||| || || | || || ||
Sbjct 2726616 AGAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGC 2726675
Query 24368 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTA 24425
|| || || ||| ||| ||| || ||||| || || ||||| | ||||| ||
Sbjct 2726676 GTTGAAAAGGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTA 2726735
Query 24426 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 24485
| | || || ||||||||||| || ||||| || ||||||||||| | || ||
Sbjct 2726736 T--GTCTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCT 2726793
Query 24486 GTAATCTGTACTTCTATACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCAC 24543
| || || ||||| | | || ||||| | || || || || || || || |||
Sbjct 2726794 GGGATTTGGACTTCAGCAGAGAA--GTTCTCAACCAAGTTCTCGTTGACAATACCATCAG 2726851
Query 24544 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGTGTTAGT--T 24600
||| || || || ||||| | | | || || ||| ||||| ||| || | | |
Sbjct 2726852 AGGCGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTGT 2726911
Query 24601 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 24660
||||| ||| || |||| ||| | || | |||||| | ||||| || || || |
Sbjct 2726912 GGTTCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTT 2726971
Query 24661 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
| ||||| || ||||| | ||||| ||||| || | ||||| || | ||| ||
Sbjct 2726972 CAGCCTTCTTGTACATTTGCCAGACTTCATGGTACTTGATTGGGAAGAGAACGAA 2727026
Score = 188 bits (208), Expect = 8e-43
Identities = 1052/1677 (63%), Gaps = 29/1677 (2%)
Strand=Plus/Plus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
||||| || |||| ||| | || | || || | || || ||||| || || || | |
Sbjct 2773312 GTGAACTGGATGGCAGCAGCAGCAGCTTGTGTTCTTAAGTAATACATACCAGTCTTCAAA 2773371
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927
|| |||| ||||| ||||||||| || || || | || || ||
Sbjct 2773372 CCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTACCCATTGTTGGGTCCTTGATG 2773431
Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987
||||| |||| ||| || || || |||||||| | ||||| |||||||| | ||
Sbjct 2773432 TGGATGTTCAAAGACTGTGACTGGTCAATGAAGGCAGCTCTGTCAGCAGCCATGTCAATA 2773491
Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047
|| |||||||| |||||||||| ||| ||||| | ||||| || |||||||
Sbjct 2773492 ATATGCTTTTGTGAGATTTCCCAAACAGTCTTATATAAGGCCTTAAGCTCATCTGGAACA 2773551
Query 53048 TTTGT--ATT-CTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104
|| | || ||| ||||| ||| | || || | ||||| || |||| |||
Sbjct 2773552 TTAGGCAATGACTGGATAGAACCATTGTTAGAAATGATGTTGTTCTTCATGGCATCGTTC 2773611
Query 53105 CATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 53161
|| | | | | ||| ||| | | | | | || || || | ||||||||
Sbjct 2773612 CAGA---TACCCAAGTCGACCAAATCACGCAACAAGTATGGGTTGACAATCTGAAATTCA 2773668
Query 53162 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 53221
|||| ||| ||||| | || ||| || ||| || || ||||| | | | || || ||
Sbjct 2773669 CCAGCCAACACTCTTCTAGAGTAGATGTTAGATGTGTATGGTTCAAAACATTCGTTGTTA 2773728
Query 53222 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 53281
||||| ||||| | |||||| ||||| ||||| || || ||||| ||| |||||| | |
Sbjct 2773729 CCCAAGATTTGGGAAGTTGAGGCAGTTGGCATTGGGGCGACCAACAAAGAATTTCTCAAA 2773788
Query 53282 CCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 53341
|||| | | || | || | | ||||| | ||| | || | ||
Sbjct 2773789 CCGTGCTTAGCCAACTTCTGCTTCAAGGAATCCCAGTCCCATAACTCAGTTGGCTTTCTG 2773848
Query 53342 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTAT 53401
||||| | || | || || || | || | |||||
Sbjct 2773849 TCCCACAAGTCATATTGTAACAATCCTTGGGAAGCTGGAGAGCCCTCGTAAGACTCGTAA 2773908
Query 53402 GGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 53461
|| ||||| | |||| | ||| | || || | ||||||| ||| || |||||
Sbjct 2773909 GGGCCTTCTTCGGCAGCCAATTCGATAGAGGCTTCAACGGCACCGTGATAGATAGTTTCA 2773968
Query 53462 AAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA-AT 53520
||||| | | || | ||| || || || || ||||| |||| | | | ||
Sbjct 2773969 AAGATTTGGATGTTCAATTCTCTAGCCTCTTGGGAGTCGAATGG-TAATCTCAATGCCAT 2774027
Query 53521 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 53580
|| | || || || ||||| ||||| | | | || ||||| | |||||| ||||| |
Sbjct 2774028 GAAGGTATCAGCCAAACCTTGGACACCCAAAGCAATTGGTCTGTTTCTCTTGTTAGATCT 2774087
Query 53581 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC---TGAC 53637
|||||||| |||| || || || || | || || || || || | ||| | ||||
Sbjct 2774088 CTCAGCTTCCGGAACTGGGTAGTAGTTTCTGTCAATGATCTTGTTCAAGTTACGAGTGAC 2774147
Query 53638 --AATT----ACTTTGACCACATCCTTCAGTTTG----AGAAAATCAAATTGTCCATCTA 53687
| || |||| | || | || | ||| | ||| | ||||| |||
Sbjct 2774148 GGACTTGGTGACTTCGTGCAACTTCTCAAAGTTGTACCACAAAGACTTGCTGTCCTTCTC 2774207
Query 53688 TTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 53747
|| | | | || ||||| || |||| ||||| || || || || | | |
Sbjct 2774208 AGCAAAGGAAGGTAAA-GCAATGGAGGCCAAGTTACAGACAGCAACTTCCTCTGGGGAAG 2774266
Query 53748 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 53807
|| | || || ||| || | ||| | ||||||| | || || || | ||| |
Sbjct 2774267 AGTACTCTACGATTTCACAACACAAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGT 2774326
Query 53808 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGG 53867
| |||| |||||||| || ||||| || | ||||| || ||||| || ||| ||||||
Sbjct 2774327 TGGTCTTCTTGTTACAGGCGTCCTTGTACAACATGAAAGGAGTACCGGTCTCAGTCTGGG 2774386
Query 53868 ATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT--TTC 53925
|| | ||| || | ||| | | ||||| | | ||| | |||| |||
Sbjct 2774387 CCTCCAAAATGGCGTACCACAACTTTTGGGCCTTGACAGTG--TTTCTTCCTCTACCTTC 2774444
Query 53926 TCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGG 53985
||| ||||| || ||||| ||| || ||||| || | || | ||| || ||
Sbjct 2774445 TCTCTCGTAACGTTCGTACAACTCTTCGAATTCGTCACCGTATACTTCTGGCAAGCCTGG 2774504
Query 53986 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 54045
| ||| | ||| | | | | ||| || |||| | | |||| ||||| || |
Sbjct 2774505 AGCTTCGTTTGGAGAGAAAAGAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAA 2774564
Query 54046 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 54105
|| |||||||| | |||| || | |||||| | |||| || || || || ||
Sbjct 2774565 GTCTGGAATCCACAAAGCTGGGAACAAATCTCTAGCTCTAATCTCTTCCTTACCGTGGTT 2774624
Query 54106 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCAT 54165
|||| | | ||| | ||| | | ||| || | ||||| ||||||||||||| || |
Sbjct 2774625 CTTTCTGATATCAATGAAGTCGAAAATGTCTGCGTGCCATGGTTCCAAGTATAAGGCAAA 2774684
Query 54166 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 54225
| | || || || ||||| || || || || | ||||||||| || ||||| | || |
Sbjct 2774685 AGCACCTGGACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTATTATTGAAGACACG 2774744
Query 54226 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 54285
| ||||||||| ||||| ||||||| ||| || || || | || ||| ||| | |
Sbjct 2774745 AACCATTGGAATGATACCGTTGGATGTACCGTTAGTACCAGCAATGTAGGCACCAGTAGA 2774804
Query 54286 ACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCG 54345
|||||| || || || ||| || || || || | || || || || || ||
Sbjct 2774805 ACGAATGTTGTGGATGTGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGT 2774864
Query 54346 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 54405
||||| || || || || || || ||| || ||| ||||| | || |||||
Sbjct 2774865 CTTTAAAGTGTCGTAAATTCCGTCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGA 2774924
Query 54406 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 54462
||||||||| || || || || || || || || |||||| |||| || ||
Sbjct 2774925 AGACATTTGTGGAGATGGGGTACCAGCGTTGAACAAAGTTGGAGAACCGTGAGTGAA 2774981
>seq1
Length=3488706
Score = 111 bits (122), Expect = 2e-19
Identities = 222/329 (67%), Gaps = 0/329 (0%)
Strand=Plus/Minus
Query 53952 CAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 54011
||||||| ||||| || || ||||||| ||| ||| || || | | || ||||
Sbjct 3155161 CAAACTCTTCTCCGTAACAATCTGCCAATCCTGGAGCTTCGTCTGGGGAAAATAAGGACC 3155102
Query 54012 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 54071
| || | | | || || | | ||| || | ||| |||||||| ||| | | ||| |
Sbjct 3155101 AATCCTCATTGTTTTTGACCCTCTCCATGAATAAATCCGGAATCCATAGACCAAAAAACA 3155042
Query 54072 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 54131
||||| || || | ||||| || || ||||| || | ||| | || | | |
Sbjct 3155041 AATCTCGCGTCCTGAGCTCCTCTTTGCCGTGGTTCTTCTTCAAATCCAAGATTTCAAAGA 3154982
Query 54132 TATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCT 54191
||||||||||| || || || ||||| | | | |||| || | |||||| ||||| |
Sbjct 3154981 CGTCAGAATGCCATGGCTCTAAATATATAGCAAAAGCTCCTGGTCTTTTGTTCCCTCCTT 3154922
Query 54192 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 54251
|||| | |||||||| |||| |||| | ||| | | ||| || | | ||| ||| ||
Sbjct 3154921 GATCCACATATCTAGCTGTGTCATTAAATACTTTAAGCATAGGCACCAACCCACTGGCTG 3154862
Query 54252 CACCATTGGTCCCGGAGATATAGCTTCCA 54280
||||||||| | || |||| | ||||
Sbjct 3154861 TACCATTGGTACTGGCTATATGGGCTCCA 3154833
Score = 109 bits (120), Expect = 7e-19
Identities = 318/485 (66%), Gaps = 5/485 (1%)
Strand=Plus/Minus
Query 52826 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAA 52885
||||| | || || || | ||||||||||| ||||| | || |||| |||||
Sbjct 3156320 GATGCAGCTTGTGTTCGCAAGTAGTACATTCCAGTTTTCAATCCCTTGTTCCAAGCGTAA 3156261
Query 52886 AAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 52945
||||| ||| || || || | | | || | | || || ||||||||| ||
Sbjct 3156260 AAATGACAACTCGTAAGCTTTCCAAACGTTGGGTTTTGTAAGTGAATATTCATACTCTGC 3156201
Query 52946 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATT 53005
|| || || || ||| || || || ||||| | | || |||||| | |||
Sbjct 3156200 AGCTGGTCAATAAACTTTCCTCTATCGGCCGCCATGTCGACAATGACCTTTTGCGAAATC 3156141
Query 53006 TCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTTT-GTAT--TCTGAAT 53061
||||| | ||||||||| || || ||| || || | ||| | ||| |||| |||||||
Sbjct 3156140 TCCCACACAGTTTTATACAAGTC-CTTTATCTCCTGTGGGATATTTGGTATGCTCTGAAT 3156082
Query 53062 AGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGT 53121
|||||| || | |||||| | ||| | ||| || ||||||| | ||| |
Sbjct 3156081 GGATCCATTTTCAAGAATAATCTTGTTCCTCATCGCAGACGTCCATAAACCTAAGTCGAT 3156022
Query 53122 TAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGT 53181
|||| | | | || | | ||| |||| || || |||||||| | ||||| | ||
Sbjct 3156021 TAAATCCTTCAATAGGTACTTATTTACTATCTGGAACTCTCCAGAAAGCACTCTTCTTGT 3155962
Query 53182 GTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGA 53241
|| | ||| |||||||| || | | |||||| || | ||| || | ||| ||
Sbjct 3155961 ATATAAATTGGAAGTATACGGCTCAAAGCATTCATTAAAGCCGAGAATCTGTGAAGTCGA 3155902
Query 53242 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATC 53301
|||||| ||||| |||||||| || || ||||| || || | | | ||| || ||
Sbjct 3155901 TGCAGTAGGCATCGGTGCCACTAACAAGGAGTTTCTGAGGCCATGTACTTTGACTTGATT 3155842
Query 53302 TTTTA 53306
||||
Sbjct 3155841 CTTTA 3155837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721525784800
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