Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 1e-13 >seq6 Length=1682205 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 ||||||||||| ||| |||| || || || || || ||||||||| ||| || || Sbjct 47113 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGTCC 47172 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | || | ||| || ||| || || |||||| | || || Sbjct 47173 TCCGACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCACCTGAC 47232 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||||||| | ||||| || || || || ||||||| | |||| | | || ||| Sbjct 47233 CAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTGACTAC 47292 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || ||||||||||| || | ||| |||| ||| |||| |||| || Sbjct 47293 AACATCCAGAAGGAATCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGG 47342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335947796550